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种系发生

种系发生的相关文献在1989年到2021年内共计131篇,主要集中在基础医学、预防医学、卫生学、内科学 等领域,其中期刊论文129篇、会议论文2篇、专利文献68145篇;相关期刊72种,包括自然杂志、疾病监测、中华预防医学杂志等; 相关会议2种,包括中国畜牧兽医学会家畜寄生虫学分会第七次代表大会暨第十二次学术研讨会、第九届海内外生命科学论坛等;种系发生的相关文献由438位作者贡献,包括付士红、梁国栋、王环宇等。

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期刊论文>

论文:129 占比:0.19%

会议论文>

论文:2 占比:0.00%

专利文献>

论文:68145 占比:99.81%

总计:68276篇

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种系发生

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  • 付士红
  • 梁国栋
  • 王环宇
  • 李铭华
  • 曹玉玺
  • 何英
  • 高晓艳
  • 孟维珊
  • 李庆伟
  • 王志玉
  • 期刊论文
  • 会议论文
  • 专利文献

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    • 黄江庆; 李彬
    • 摘要: 近年来,随着抗菌药物的滥用,全球范围内的多重耐药菌逐年增加.对细菌进化规律的探究可能是解决这一问题的关键.高通量测序,又称为下一代测序(NGS),可以合理利用细菌全基因组所蕴含的强大信息,在细菌进化规律的探索中展现出前所未有的分辨能力.本文主要就NGS的概述及其在细菌进化分析方面的研究与进展进行简要综述.
    • 王玉; 温福岳; 陈利君; 陈庭
    • 摘要: 该文综述了指甲兰属种质资源的历史、地理分布概况和保护现状,以及该属植物在组织培养、药用价值及化学成分分析、香味成分研究与种系发生等领域的国内外研究成果,并对该属植物在未来的研究重点进行了探讨和分析.结果表明:指甲兰属植物是热带地区重要的花卉,具有极高的观赏价值和药用价值,通过有效地保护和利用好该属资源,并在多个学术领域内开展该属植物研究,不仅可以为相关研究提供技术参考和理论支持,而且能够充分挖掘其应用价值.然而,国内外在相关领域的各项研究进展还不够深入,未来指甲兰属植物应加强以下方面的研究:(1)开展资源引种与回归保育等方面的实践工作及研究;(2)利用稀缺资源和母本优势,开展组织培养与属间品种培育方面的研究;(3)充分发掘其药用价值,积极开展植物化学成分方面的研究;(4)开展指甲兰属香味成分分析与应用研究,进而开展该属传粉生物学的研究;(5)利用分子生物学领域的最新技术和方法,揭示出该属在相关类群中的地位和其界定范围.
    • 任燕; 林启辉; 靳淼; 许少坚; 张海龙; 全德甫; 赖晓玲; 满云翔; 郝夏琼; 王金明
    • 摘要: Objective To analyze epidemiological and etiological characteristics of norovirus in Longhua District, Shenzhen. Methods Three hundred and seventeen suspected cases among the 29 clusters of epidemic gastroenteritis from 6 subdistricts (Guanhu, Minzhi, Longhua, Dalang, Fucheng and Guanlan) in Longhua District, Shenzhen from October 2016 to September 2017 were selected as research subjects. A total of 317 anal swab specimens of the subjects were collected. Fluorescence quantitative PCR was adopted for norovirus examination of the samples and reverse transcription PCR for further examination of positive specimens. Meanwhile, gene amplification was conducted in polymerase and capsid area, and sequencing and phylogenetic analysis were conducted to determine virus genotypes.Results For the 317 suspected cases, 156 were laboratory confirmed, among which 99 were children under five years old (63.46%, 99/156). The 29 reported clusters of epidemic gastroenteritis were mainly from kindergartens, accounting for 75.9% (22/29). Among the 317 specimens, 156 were positive of norovirus GII nucleic acid, with a positive rate of 49.21%. Norovirus GI was undetected. Reverse transcription PCR amplification was performed for the virus polymerase and capsid area in the 156 positive specimens. Eighty two samples were positive and 82 sequences were obtained. Phylogenetic tree construction results indicated that there were four genotypes causing norovirus epidemics in Longhua District, Shenzhen from October 2016 to September 2017, including GⅡ.P16-GⅡ.2, GⅡ.Pe-GⅡ. 4 Sydney 2012, GⅡ.P17-GⅡ.17 and GⅡ.P12-GⅡ.3 genotypes. GII. P16-GⅡ.2 norovirus caused 18 clusters, accounting for 62.1% (18/29). Conclusions Surveillance of norovirus epidemics in Longhua District, Shenzhen should be furtherly enhanced and children under 5 years old should be paid close attention. Meanwhile, the emergence of mutants need to be closely monitored.%目的 分析深圳市龙华区诺如病毒疫情流行特征及病原学特点.方法 选取2016年10月—2017年9月期间深圳市龙华区共6个街道(观湖、民治、龙华、大浪、福城和观澜)29起聚集性胃肠炎疫情中的317例疑似病例作为研究对象.收集研究对象肛拭子标本,共计317份,采用荧光定量PCR方法对样品进行诺如病毒检测,阳性样本进一步用逆转录PCR法同时对聚合酶区-衣壳区进行基因扩增,并进行测序和进化分析以鉴定其基因型.结果 317例疑似病例中,实验室确诊156例,其中5岁以下儿童99例(63.46%,99/156).29起聚集性胃肠炎疫情报告单位主要为幼儿园,占75.9%(22/29).在317份标本中,156份为诺如病毒GⅡ核酸阳性,阳性率为49.21%.未检出诺如病毒GI.对156份诺如病毒GⅡ核酸阳性的标本进行聚合酶区-衣壳区序列逆转录PCR扩增,共82份阳性,获得82株毒株序列.系统发生树构建结果发现,2016年10月—2017年9月期间,引起深圳市龙华区诺如病毒疫情的基因型有4种,包括GⅡ.P16-GⅡ.2、GⅡ.Pe-GⅡ.4 Sydney 2012、GⅡ.P17-GⅡ.17和GⅡ.P12-GⅡ.3.其中,GⅡ.P16-GⅡ.2引起的有18起,占62.1%(18/29). 结论 深圳市龙华区应进一步加强诺如病毒聚集性疫情监测,重点关注幼儿园5岁及以下儿童,并且要重点监测是否有变异株出现.
    • 王金明; 满云翔; 林启辉; 许少坚; 姚相杰; 任燕; 陈龙; 全德甫; 郝夏琼; 叶春立; 赖晓玲
    • 摘要: Objective To analysis the etiological characsteristics of hand,foot,and mouth disease (HFMD) in Longhua district of Shenzhen in 2017.Methods Fluorescent quantitation RT-PCR method was used to detect nucleic acid of enteroviurs (EV),enteroviurs A71 (EV71),coxsackievirus A16 (CV A16) in anal swab samples of 242 clinically diagnosed HFMD cases from sentinel hospitals.Both VP1 region of the enterovirus other than EV71 or CV A16 and VP1 of EV71 were sequenced for subtyping and the systematic evolution analysis.Result There were 190 laboratory-confirmed cases and the positive rate was 78.51% (190/242),including 32 cases of EV71 infection (16.84%,32/190),11 cases of CV A 16 infection (5.79%,11/190),and 126 cases of CV A6 infection (66.32%,126/190).The males and females accounted for 57.9% (110/190) and 42.1% (80/190),respectively.The patients under the age of three years old accounted for 78.95%,(150/190).Phylogenetic analysis indicated that the epidemic EV-A71 in Longhua district of Shenzhen in 2017 belonged to subgenerotype C4a and CV A6 belonged to subgenerotype D3,while CV A10 belonged to subgenerotype C.Conclusions The HFMD surveillance in the district shall be strengthened.Children under three years old,spectrum of pathogens and evolutionary status of important pathogens in Longhua district of Shenzhen should be concerned.%目的 分析2017年深圳市龙华区手足口病(hand,foot,and mouth disease,HFMD)病原学特点.方法 采用实时荧光PCR方法对哨点医院送检的242份HFMD临床诊断病例的肛拭子样品进行肠道病毒(enteroviurs,EV)、肠道病毒A组71型(EV71)和柯萨奇病毒A组16型(coxsackievirus A16,CV A16)核酸检测,并对非EV71非CV A16的其他肠道病毒和EV71的VP1区序列进行测定,亚型鉴定和系统进化分析.结果 实验室确诊病例有190例,阳性率为78.51%(190/242),其中,EV71感染32例(16.84%,32/190)、CV A16感染11例(5.79%,11/190)、CV A6感染126例(66.32%,126/190).实验室确诊病例中,男性占57.9% (110/190),女性占42.1%(80/190);3岁以下儿童占78.95%(50/190).系统进化树分析结果显示,2017年深圳市龙华区流行的EV71属于C4a进化分支,CV A6属于D3进化分支,CV A10属于C进化分支.结论 深圳市龙华区应进一步加强辖区HFMD监测,重点关注3岁以下儿童及病原谱构成和重要病原体进化情况.
    • 陈昕昶; 张文宏
    • 摘要: With the development of technology and the reduction of cost,whole genome sequencing has been widely used in the research of Mycobacterium tuberculosis (M.tuberculosis) in various respects,including micro-evolution and transmission,macro-evolution and phylogeny,and drug resistance detection.According to the existing research results,genome-wide sequencing has solved many problems that can not be solved by traditional molecular research methods,such as identification of transmission chain,differentiation of recurrent and reinfection,analysis of the evolution of M.tuberculosis,rapid diagnosis of tuberculosis resistance,and diagnosis of mixed infection.Nonetheless,there are still many problems that need to be solved urgently.In this paper,the current research directions and achievements of whole genome sequencing are reviewed,the limitations are proposed,and the future applications are prospected.%随着技术的发展及成本的降低,全基因组测序已经广泛应用于结核分枝杆菌的各方面研究当中,包括微进化与传播、宏观进化与种系发生、耐药检测等.根据现有研究成果,全基因组测序已经解决了很多传统分子研究方法无法解决的问题,比如鉴定传播链、分辨复发与再感染、解析结核分枝杆菌的进化过程、快速诊断结核病耐药、诊断混合感染等.尽管如此,目前还存在很多问题亟需解决.笔者对全基因组测序技术的研究方向及成果进行回顾,提出其局限性,并展望其应用前景.
    • 林小娟; 王素婷; 陶泽新; 刘桂芳; 宋立志; 徐爱强
    • 摘要: Objective To analyze the genetic characteristics of echovirus 6 ( E-6) strains isolated from patients with acute meningitis/encephalitis syndrome ( AMES) in 2014 and sewage samples in 2013—2014 in Shandong province and to investigate their correlations.Methods Enterovirus strains were isolated from cerebrospinal fluid, stool and throat swab samples collected from 940 cases of AMES and 96 sewage samples used for environmental surveillance.The positive isolates were identified by molecular typing meth-od.Homologous and phylogenetic analyses based on the VP1 sequences of E-6 isolates were performed.Re-sults Altogether 47 E-6 strains were isolated from patients with AMES in 2014, accounting for 29.56%of all isolated enteroviruses ( EVs) strains.No E-6 strains were isolated from AMES cases in 2013.Data of the environmental surveillance showed that E-6 virus strains had been frequently detected in sewage samples since the summer of 2013 to the end of 2014.In total, 40 E-6 virus strains were isolated (7.87% of total isolated EVs strains) in 2013 and 139 E-6 virus strains (26.18%) in 2014.Phylogenetic analysis indicated that the E-6 isolates recruited in this study belonged to clusters A and C with high intracluster sequence iden-tities between AMES and environmental isolates.The nucleotide identities were 98.3%-100% among cluster A E-6 virus strains isolated from AMES cases in 2014 and 96.6%-100% among cluster A E-6 virus environ-mental isolates during the surveillance year 2013—2014.The cluster A E-6 virus strains shared 97.1%-100% nucleotide identities between the AMES and environmental isolates.For cluster C E-6 virus strains, the nucleotide identities were 100%, 98.7%-100% and 99.1%-100%, respectively.Conclusion The epidemic of viral encephalitis in Shandong province in 2014 was associated the transmission of two lineages of E-6 virus.Environmental surveillance revealed the potential epidemic of E-6 virus even before the epidemic of viral encephalitis in Shandong province, indicating the possibility of using environmental surveillance for early warning of related diseases.%目的 探索山东省2014年急性脑膜炎/脑炎症候群(acute meningitis/encephalitis syn-drome,AMES)病例和2013—2014年环境污水监测中埃可病毒(echovirus,E)6型的基因特征及其关联.方法 对2014年的AMES病例标本和2013—2014年的环境监测标本进行肠道病毒(enterovir-us,EV)分离,阳性分离物采用分子生物学方法鉴定型别,并对E-6 VP1区序列进行同源性和系统进化学分析.结果 2013年AMES病例中未检出E-6,2014年分离到47株E-6,占EV分离株的29.56%.环境污水监测结果显示E-6从2013年夏季开始频繁出现并一直持续到2014年底,2013年分离到40株E-6,占总EV分离株的7.87%;2014年分离到139株E-6,占总分离株的26.18%.系统进化树分析表明本研究分离株属于A、C两个基因簇,各簇之内的环境和AMES分离株之间有密切的亲缘关系.在A基因簇中,2014年AMES分离株之间的核苷酸同源性是98.3%~100%,2013—2014年环境分离株之间的同源性是96.6%~100%,二者之间为97.1%~100%,C基因簇的以上核苷酸同源性分析结果分别是100%、98.7%~100%和99.1%~100%.结论 2014年山东省发生了两条E-6传播链导致的病毒性脑炎的流行;在E-6相关的病毒性脑炎流行之前,通过环境监测敏感地监测到E-6在本地的潜在流行,证明环境监测具有对相关疾病的早期预警能力.
    • 朱娜; 佟瑞; 周为民; 谭心怡; 楼永良; 谭文杰
    • 摘要: 目的 分析人细小病毒B19及人细小病毒4(PARV4)在西藏藏族人群中与内地汉族人群中的基因特点.方法 采用建立的B19与PARV4 PCR筛查方法,分别从西藏藏族人群中与内地汉族人群血液标本中获得人细小病毒B19及PARV4的部分基因片段,经纯化、测序后,进行基因进化树分析.结果 共获得10个B19 VP1基因片段序列(西藏,2个;四川,3个;浙江,5个);10个PAV4ORF1基因片段序列(西藏,2个;四川,2个;云南,1个;浙江,5个);西藏藏族人群中细小病毒B19基因与内地汉族人群同属基因1A亚型,但为不同进化分支;而西藏藏族与内地汉族人群PAV4基因属同一分支.结论 细小病毒B19基因在西藏藏族与内地汉族人群中的差异分析为该病的检测与控制提供了参考.%Objective To investigate the genetic diversity differences of human parvoviruse B19 and parvovirus 4 (PRVA4) in Tibet and Han population in China.Methods Phylogenetic analysis was performed on genome fragments of B19 or PARV4 obtained from the blood samples of Tibet and Han population in China by using a PCR followed by sequencing.Results Ten partial VP1 fragments of B19 (2 from Tibet,3 from Sichuan,5 from Zhejiang) and 10 partial ORF1 fragments of PAV4 (2 from Tibet,2 from Sichuan,1 Yunnan,5 from Zhejiang) were obtained.Phylogenetic analysis indicated that different B19 subgroup circulates in Tibet and Han population although they belong to the same 1A subtype.While the gene evolution of PAV4 is very conserved between the Tibet and Han population in China.Conclusion These studies on genetic diversity of B19 in different Chinese population provide a way for detection and prevention of B19 human parvovirus infection.
    • 严冬梅; 杨朝晖; 张勇; 祝双利; 王东艳; 朱晖; 李晓嫘; 许文波
    • 摘要: 目的 鉴定引起2010年湖北省急性出血性结膜炎(acute hemorrhagic conjunctivitis,AHC)疫情的病原体,并对其进行基因进化分析.方法 采集20份门诊AHC患者眼结膜拭子,对其进行病毒分离,随后通过PCR方法分别检测阳性分离物中肠道病毒70型(human enterovirus D-70,EV-D70)和柯萨奇A24变异株(Coxsackievirus A24 variant,CV-A24v).对CV-A24v分离株进行VP1区和3C区全序列测定,分析其与全球流行CV-A24v的基因进化关系.结果 20份标本中有11份病毒分离阳性,PCR检测表明这11份病毒分离物为CV-A24v.基于3C区和VP1区构建的基因进化树表明湖北CV-A24v属于GenotypeⅣ基因型的Cluster 3(GⅣ-C3),而且在GⅣ-C3内湖北CV-A24v分属于A和B两个传播链.结论 本研究表明2010年至少有两个CV-A24v传播链在湖北同时流行.%Objective To identify the etiology of an outbreak of cute hemorrhagic conjunctivitis (AHC) occurred in Hubei in 2010 and analyze the molecular evolution of these viruses.Methods Conjunctival swabs from 20 eyes were collected from AHC patients,performed virus isolation was performed and then these specimens were tested for human enterovirus 70 (EV-D70) and Coxsackievirus A24 variant (CV-A24v) using polymerase chain reaction (PCR) technique.All CV-A24v isolates were subjected to 3C and VP1 coding region sequencing and phylogentic tree were constructed for Hubei CV-A24v and other CV-A24v worldwide based on 3C and VP1 region,respectively.Results The results showed that 11 out of 20 specimens were positive for virus isolation and identified as CV-A24v.The phylogenetic tree based on 3C region showed Hubei CV-A24v belong to Cluster 3 in Genotype IV (GIV-C3)with strains isolated throughout the world after 2010 and further divided into A and B lineages.Conclusions This study suggested that at least two transmission lineages circulated in HuBei province in 2010 causing the AHC outbreak nationwide.
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