首页> 外文OA文献 >Applicability of a multiplex PCR to detect O26, O45, O103, O111, O121, O145, and O157 serogroups of Escherichia coli in cattle feces1
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Applicability of a multiplex PCR to detect O26, O45, O103, O111, O121, O145, and O157 serogroups of Escherichia coli in cattle feces1

机译:多重PCR检测O26,O45,O103,O111,O121,O145和O157 Serogrous在牛粪中的大肠杆菌的o26,O121,O145和O157 Serogroups

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摘要

Shiga toxin-producing Escherichia coli (STEC), particularly O157, are major food borne pathogens. Non-O157 STEC, particularly O26, O45, O103, O111, O121, and O145, have also been recognized as a major public health concern. Unlike O157, detection procedures for non-O157 have not been fully developed. Our objective was to develop a multiplex PCR to distinguish O157 and the ‘top six’ non-O157 serogroups (O26, O45, O103, O111, O121, and O145) and evaluate the applicability of the multiplex PCR to detect the seven serogroups of E. coli in cattle feces. Published sequences of O-specific antigen coding genes, rfbE (O157)and wzx and wbqE-F (non-O157), were analyzed to design serogroup-specific primers. Thespecificity of amplifications was confirmed with 138 known STEC strains and the reactionyielded the expected amplicons for each serogroup. In feces spiked with pooled 7 STECstrains, the sensitivity of the detection was 4.1 X 10[superscript]5 CFU/g before enrichment and 2.3 X 10[superscript]2 after 6 h enrichment in E. coli broth. Additionally, 216 fecal samples from cattle were collected and tested by multiplex PCR and cultural methods. The multiplex PCR revealed a high prevalence of all seven serogroups (178 [O26], 108 [O45], 149 [O103], 30 [O111], 103 [O121], 5 [O145], and 160 [O157]) of 216 samples in fecal samples. Cultural procedures identified 33.1% (53/160) and 35.5% (11/31) of PCR-positive samples for E. coli O157 and non-O157 serogroups, respectively. Samples that were culture-positive were all positive by the multiplex PCR. The multiplex PCR can be used to identify serogroups of putative STEC isolates.
机译:产生志贺毒素的大肠杆菌(STEC),特别是O157是主要的食源性病原体。非O157 STEC,尤其是O26,O45,O103,O111,O121和O145,也被认为是主要的公共卫生问题。与O157不同,非O157的检测程序尚未完全开发。我们的目标是开发一种多重PCR来区分O157和“前六个”非O157血清群(O26,O45,O103,O111,O121和O145),并评估该多重PCR在检测E的七个血清群中的适用性牛粪中的大肠杆菌分析了O特异性抗原编码基因rfbE(O157)以及wzx和wbqE-F(非O157)的公开序列,以设计血清群特异性引物。用138个已知的STEC菌株确认了扩增的特异性,并且该反应产生了每个血清群的预期扩增子。在掺有7种STEC菌株的粪便中,在大肠杆菌肉汤中富集前检测灵敏度为4.1 X 10 ^ 5 CFU / g,富集6 h后检测灵敏度为2.3 X 10 ^ 2。另外,收集了216份来自牛的粪便样品,并通过多重PCR和培养方法进行了测试。多重PCR显示216个所有七个血清群(178 [O26],108 [O45],149 [O103],30 [O111],103 [O121],5 [O145]和160 [O157])的患病率很高粪便样本中的样本。培养程序确定了大肠杆菌O157和非O157血清群的PCR阳性样品分别为33.1%(53/160)和35.5%(11/31)。通过多重PCR,培养阳性的样品均为阳性。多重PCR可用于鉴定推定的STEC分离物的血清群。

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