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Haplotypes That Are Mosaic for Wild-Type and T Complex-Specific Alleles in Wild Mice

机译:野生型和T复合体特定等位基因的马赛克的单倍型。

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摘要

Two outstanding problems pertaining to the population dynamics and evolution of the t complex in mice concern the frequency of t haplotypes in the wild and the degree to which these haplotypes recombine with their wild-type homologs. To address these problems, the frequency and distribution of several t complex-associated restriction fragment variants in wild mice were estimated. Sixty-four versions of chromosome 17 from wild-derived Mus musculus musculus and Mus musculus domesticus were examined with DNA probes for six loci within the t complex that exhibit restriction fragment variation. All six probes detect variants that have heretofore been found exclusively associated with the t complex. Haplotype analysis of wild-derived chromosomes revealed a high frequency (45.3%) of ``mosaic'' haplotypes with a mixture of t-specific and wild-type variants and only one haplotype with t-specific variants at all six loci. When 12 well-characterized t haplotypes isolated from diverse geographic regions were analyzed, only three had a complete set of t-specific restriction fragments for the six loci examined. The preponderance of mosaic haplotypes in both groups of mice can be explained by any one of the following hypotheses: genetic recombination between t haplotypes and their wild-type homologs, the persistence in wild populations of haplotypes that have descended from ancestral partial t haplotypes, or that the restriction fragment variants fixed in the ancestral t haplotype were also fixed in some wild-type haplotypes. There is evidence to support all three of these hypotheses in our data. The allelic composition of some mosaic haplotypes indicates that they may have been formed by segmental recombination, either double crossing over or gene conversion, rather than by simple single crossovers. The occurrence of indistinguishable mosaic haplotypes in both M. m. musculus and M. m. domesticus suggests that these haplotypes are ancestral rather than recently derived.
机译:与小鼠t复合体的种群动态和进化有关的两个突出问题涉及野生t单倍型的频率以及这些单倍型与其野生型同源物重组的程度。为了解决这些问题,估计了在野生小鼠中几种与t复合物相关的限制性片段变体的频率和分布。用DNA探针对t复合物中6个基因座的野生型小家鼠和家蝇的17号染色​​体的64个版本进行了检查,这些片段表现出限制性片段的变异。所有六个探针均检测到迄今发现仅与t复合物相关的变体。对野生来源染色体的单倍型分析显示,``mosaic''单倍型的频率很高(45.3%),在所有六个基因座上均带有t特异性和野生型变异体的混合物,并且只有一种具有t特异性变异体的单体型。当分析从不同地理区域分离出的12个特征明确的t型单倍型时,对于所检查的6个基因座,只有3个具有完整的t特异性限制性片段。两组小鼠中镶嵌单倍型的优势可以通过以下任一假说来解释:t单倍型与其野生型同源物之间的基因重组,源自祖先部分t单倍型的单倍型在野生种群中的持续存在,或祖先t单倍型中固定的限制性片段变体也固定在某些野生型单倍型中。有证据支持我们数据中的所有三个假设。一些镶嵌单倍型的等位基因组成表明它们可能是通过节段重组(双交换或基因转化)而不是简单的单交换形成的。两种M. m。中都无法区分的镶嵌单倍型的发生。小家鼠domesticus表明这些单倍型是祖先的,而不是最近衍生的。

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