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A Real-Time PCR Screening Assay for Rapid Detection of Listeria Monocytogenes Outbreak Strains

机译:快速检测单核细胞增生李斯特菌暴发菌株的实时PCR筛选方法

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摘要

From January 2015 to March 2016, an outbreak of 23 human cases of listeriosis in the Marche region and one human case in the Umbria region of Italy was caused by strains showing a new pulsotype never described before in Italy. A total of 37 clinical strains isolated from patients exhibiting listeriosis symptoms and 1374 strains correlated to the outbreak were received by the Italian National Reference Laboratory for (It NRL Lm) of Istituto Zooprofilattico Sperimentale dell’Abruzzo e del Molise (IZSAM) for outbreak investigation. A real-time PCR assay was purposely designed for a rapid screening of the strains related to the outbreak. PCR-positive strains were successively typed through molecular serogrouping, pulsed field gel electrophoresis (PFGE), and Next Generation Sequencing (NGS). Applying the described strategy, based on real-time PCR screening, we were able to considerably reduce time and costs during the outbreak investigation activities.
机译:从2015年1月到2016年3月,马尔凯地区爆发了23例人类李斯特菌病病例,意大利翁布里亚地区爆发了1例人类病例,原因是菌株显示了一种意大利从未有过的新脉冲型。意大利国家参考实验室(It NRL Lm)从Istituto Zooprofilattico Sperimentale de Abruzzo e del Molise(IZSAM)接收了总共37株从表现出李斯特菌病症状的患者中分离出的临床菌株和1374株与暴发相关的菌株,用于暴发调查。实时PCR分析是专门为快速筛查与暴发有关的菌株而设计的。通过分子血清分组,脉冲场凝胶电泳(PFGE)和下一代测序(NGS)连续对PCR阳性菌株进行分型。应用描述的策略,基于实时PCR筛选,我们能够在暴发调查活动中大大减少时间和成本。

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