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Genetic and functional characterisation of the lactococcal P335 phage-host interactions

机译:乳球菌P335噬菌体-宿主相互作用的遗传和功能表征。

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摘要

Background: Despite continuous research efforts, bacterio(phages) infecting Lactococcus lactis starter strains persist as a major threat to dairy fermentations. The lactococcal P335 phages, which are currently classified into four sub-groups (I-IV), are the second most frequently isolated phage group in an industrial dairy context. Results: The current work describes the isolation and comparative genomic analysis of 17 novel P335 group phages. Detailed analysis of the genomic region of P335 phages encoding the so-called “baseplate”, which includes the receptor binding protein (RBP) was combined with a functional characterization of the RBP of sub-group III and IV phages. Additionally, calcium-dependence assays revealed a specific requirement for calcium by sub-group IV phages while host range analysis highlighted a higher number of strains with CWPS type A (11 of 39 strains) are infected by the P335 phages assessed in this study than those with a C (five strains), B (three of 39 strains) or unknown (one of 39 strains) CWPS type. Conclusions: These analyses revealed significant divergence among RBP sequences, apparently reflecting their unique interactions with the host and particularly for strains with a type A CWPS. The implications of the genomic architecture of lactococcal P335 phages on serving as a general model for Siphoviridae phages are discussed.
机译:背景:尽管进行了不断的研究,但感染乳球菌发酵菌的细菌(噬菌体)仍然是乳制品发酵的主要威胁。乳球菌P335噬菌体目前被分为四个亚组(I-IV),是工业乳业中第二个最常分离的噬菌体组。结果:目前的工作描述了17种新型P335组噬菌体的分离和比较基因组分析。将编码所谓的“基板”(包括受体结合蛋白(RBP))的P335噬菌体的基因组区域的详细分析与亚组III和IV噬菌体的RBP的功能表征相结合。此外,钙依赖性测定揭示了IV组亚噬菌体对钙的特殊需求,而宿主范围分析显示,与本研究相比,本研究评估的P335噬菌体感染了更多数量的CWPS A型菌株(39株)中的P335具有C(5个菌株),B(39个菌株中的三个)或未知(39个菌株之一)的CWPS类型。结论:这些分析揭示了RBP序列之间的显着差异,显然反映了它们与宿主的独特相互作用,特别是对于具有A型CWPS的菌株。讨论了乳球菌P335噬菌体的基因组结构对作为Siphoviridae噬菌体通用模型的意义。

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