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首页> 外文期刊>Journal of magnetic resonance imaging: JMRI >Radiomics Strategy for Molecular Subtype Stratification of Lower‐Grade Glioma: Detecting IDH and TP53 TP53 Mutations Based on Multimodal MRI
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Radiomics Strategy for Molecular Subtype Stratification of Lower‐Grade Glioma: Detecting IDH and TP53 TP53 Mutations Based on Multimodal MRI

机译:较低级胶质瘤分子亚型分层的辐射瘤策略:检测基于多峰MRI的IDH和TP53 TP53突变

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摘要

Background Noninvasive detection of isocitrate dehydrogenase (IDH) and TP53 mutations are meaningful for molecular stratification of lower‐grade gliomas (LrGG). Purpose To explore potential MRI features reflecting IDH and TP53 mutations of LrGG, and propose a radiomics strategy for detecting them. Study Type Retrospective, radiomics. Population/Subjects A total of 103 LrGG patients were separated into development ( n ?=?73) and validation ( n ?=?30) cohorts. Field Strength/Sequence T 1 ‐weighted (before and after contrast‐enhanced), T 2 ‐weighted, and fluid‐attenuation inversion recovery images from 1.5T ( n ?=?37) or 3T ( n ?=?66) scanners. Assessment After data preprocessing, high‐throughput features were derived from patients' volumes of interests of different sequences. The support vector machine‐based recursive feature elimination (SVM‐RFE) was adopted to find the optimal features for IDH and TP53 mutation detection. SVM models were trained and tested on development and validation cohort. The commonly used metric was used for assessing the efficiency. Statistical Tests One‐way analysis of variance (ANOVA), chi‐square, or Fisher's exact test were applied on clinical characteristics to confirm whether significant differences exist between three molecular subtypes decided by IDH and TP53 status. Intraclass correlation coefficients were calculated to assess the robustness of the radiomics features. Results The constituent ratio of histopathologic subtypes was significantly different among three molecular subtypes ( P ?=?0.017). SVM models for detecting IDH and TP53 mutation were established using 12 and 22 optimal features selected by SVM‐RFE. The accuracies and area under the curves for IDH and TP53 mutations on the development cohort were 84.9%, 0.830, and 92.0%, 0.949, while on the validation cohort were 80.0%, 0.792, and 85.0%, 0.869, respectively. Furthermore, the stratified accuracies of three subtypes were 72.8%, 71.9%, and 70%, respectively. Data Conclusion Using a radiomics approach integrating SVM model and multimodal MRI features, molecular subtype stratification of LGG patients was implemented through detecting IDH and TP53 mutations. The results suggested that the proposed approach has promising detecting efficiency and T 2 ‐weighted image features are more important than features from other images. Level of Evidence: 3 Technical Efficacy: Stage 2 J. Magn. Reson. Imaging 2018;48:916–926.
机译:背景技术非侵入性检测脱氢酶(IDH)和TP53突变对较低级Gliomas(LRGG)的分子分层是有意义的。目的探索反映LRGG的IDH和TP53突变的潜在MRI特征,并提出了一种检测它们的辐射族策略。研究类型回顾性,辐射瘤。人口/受试者共有103例LRGG患者被分成开发(N?=?73)和验证(N?=?30)队列。场强/序列T 1 - 重量(在对比度和后和造影剂之前和之后),T 2-重量和流体衰减反转恢复图像从1.5T(n?=Δ37)或3T(n?=Δ66)扫描仪。在数据预处理后评估,高通量特征来自不同序列的患者的患者体验。采用支持向量机基机的递归特征消除(SVM-RFE)以找到IDH和TP53突变检测的最佳特征。 SVM模型培训并在开发和验证队列上进行了测试。常用的指标用于评估效率。统计检验方差单向分析(ANOVA),Chi-Square或Fisher的确切试验临床特征,以确认三种分子亚型在IDH和TP53状态决定的三种分子亚型之间是否存在显着差异。计算腹部相关系数以评估戒烟特征的鲁棒性。结果三种分子亚型中组织病理学亚型的组分比在显着不同(P?= 0.017)。使用由SVM-RFE选择的12和22个最佳特征建立用于检测IDH和TP53突变的SVM模型。在验证队列的IDH和TP53突变下的曲线和TP53突变下的准确度和面积为84.9%,0.830%,0.949,而在验证队列中分别为80.0%,0.792和85.0%,0.869。此外,三种亚型的分层精度分别为72.8%,71.9%和70%。数据结论采用辐射瘤方法整合SVM模型和多模式MRI特征,通过检测IDH和TP53突变来实现LGG患者的分子亚型分层。结果表明,所提出的方法有前途的检测效率,T 2 - 重量的图像特征比来自其他图像的特征更重要。证据水平:3技术疗效:第2阶段J. MANG。恢复。 2018年成像; 48:916-926。

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  • 作者单位

    Department of Biomedical EngineeringFourth Military Medical UniversityXi'an Shaanxi P.R. China;

    Department of RadiologyTangdu Hospital Fourth Military Medical UniversityXi'an Shaanxi P.R. China;

    Department of NeurosurgeryTangdu Hospital Fourth Military Medical UniversityXi'an Shaanxi P.R;

    Department of Biomedical EngineeringFourth Military Medical UniversityXi'an Shaanxi P.R. China;

    Department of Biomedical EngineeringFourth Military Medical UniversityXi'an Shaanxi P.R. China;

    Departments of Radiology Computer Science and Biomedical EngineeringState University of New;

    Department of Biomedical EngineeringFourth Military Medical UniversityXi'an Shaanxi P.R. China;

    Department of Biomedical EngineeringFourth Military Medical UniversityXi'an Shaanxi P.R. China;

    Department of RadiologyTangdu Hospital Fourth Military Medical UniversityXi'an Shaanxi P.R. China;

    Department of Biomedical EngineeringFourth Military Medical UniversityXi'an Shaanxi P.R. China;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 诊断学 ;
  • 关键词

    lower‐grade glioma; multimodal MRI; IDH; TP53; radiomics;

    机译:较低级胶质瘤;多模式MRI;IDH;TP53;辐射瘤;

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