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Molecular epidemiology of Cryptosporidium subtypes in cattle in England

机译:英国牛隐孢子虫亚型的分子流行病学

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摘要

Samples of Cryptosporidium spp., collected in a cross-sectional study of calves (median age 26 days) from 41 farms in Cheshire, UK, underwent molecular typing. The aim was to determine naturally occurring species/genotypes and to investigate transmission pathways within a local area. Of 60 positive samples, 54 were sequenced at an 18S rRNA locus and 51 were typed at a GP60 locus. C. parvum was identified in 50 samples, three cases were C. bovis and one was Cryptosporidium deer-like genotype. Six GP60 subgenotypes were identified. One subgenotype (IIaA15G2R1) was highly prevalent throughout the study area. A single subgenotype was identified on 20/22 farms. Two subgenotypes were found on 2/22 farms. The spatial scan statistic detected a cluster of subgenotype IIaA15G2R1 comprising seven farms. This suggests local transmission of the parasite between farms. As most of the isolates detected were the potentially zoonotic C. parvum allele IIa, intervention strategies should be considered to reduce the threat to public health. Biosecurity measures may reduce transmission between farms and result in lower levels of environmental contamination.
机译:在英国柴郡41个农场的犊牛(年龄中位数26天)的横断面研究中收集了隐孢子虫的样本,并进行了分子分型。目的是确定天然存在的物种/基因型,并研究局部区域内的传播途径。在60个阳性样品中,有54个在18S rRNA基因座处测序,有51个在GP60基因座处定型。在50个样本中鉴定出小隐孢子虫,其中3例为牛隐孢子虫,1例为隐孢子虫鹿样基因型。确定了六个GP60亚型。在整个研究领域中,一种亚基因型(IIaA15G2R1)非常流行。在20/22个农场中鉴定出单一亚型。在2/22个农场中发现了两个亚基因型。空间扫描统计数据检测到包含七个农场的亚基因型IIaA15G2R1的簇。这表明农场之间寄生虫的局部传播。由于检测到的大多数分离物都是潜在的人畜共患病小球藻等位基因IIa,因此应考虑采取干预策略以减少对公共卫生的威胁。生物安全措施可以减少农场之间的传播,并导致较低水平的环境污染。

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