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Role of Tryptophan 38 in Loading Substrate Chain into the Active-site Tunnel of Cellobiohydrolase I from Trichoderma reesei

机译:色氨酸38在将底物链加载到纤维素水解酶I的活性部位隧道中的作用

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摘要

Cellobiohydrolase I from Trichoderma reesei (TrCel7A) is one of the best-studied cellulases, exhibiting high activity towards crystalline cellulose. Tryptophan residues at subsites -7 and -4 (Trp40 and Trp38 respectively) are located at the entrance and middle of the tunnel-like active site of TrCel7A, and are conserved among the GH family 7 cellobiohydrolases. Trp40 of TrCel7A is important for the recruitment of cellulose chain ends on the substrate surface, but the role of Trp38 is less clear. Comparison of the effects of W38A and W40A mutations on the binding energies of sugar units at the two subsites indicated that the contribution of Trp38 to the binding was greater than that of Trp40. In addition, the smooth gradient of binding energy was broken in W38A mutant. To clarify the importance of Trp38, the activities of TrCel7A WT and W38A towards crystalline cellulose and amorphous cellulose were compared. W38A was more active than WT towards amorphous cellulose, whereas its activity towards crystalline cellulose was only one-tenth of that of WT. To quantify the effect of mutation at subsite -4, we measured kinetic parameters of TrCel7A WT, W40A and W38A towards cello-oligosaccharides. All combinations of enzymes and substrates showed substrate inhibition, and comparison of the inhibition constants showed that the Trp38 residue increases the velocity of substrate intake (k_(on) for forming productive complex) from the minus side of the subsites. These results indicate a key role of Trp38 residue in processively loading the reducing-end of cellulose chain into the catalytic tunnel.
机译:来自Trichoderma Reesei(Trelect7a)的纤维二硫化酶I是最佳研究的纤维素酶之一,对结晶纤维素具有高活性。子区域-7和-4(分别的TRP40和TRP38)的色氨酸残基位于Trel7a的隧道状活性位点的入口和中间,并在GH系列7纤维生物水解酶中保守。 Trp40的Trel7a对于纤维素链的募集是重要的,但TRP38的作用较小。 W38A和W40A突变对两套糖单位结合能的影响表明,TRP38对结合的贡献大于TRP40的贡献。此外,在W38A突变体中破裂了结合能量的平滑梯度。为了阐明TRP38的重要性,比较了Tr​​p38的重要性,比较了Tr​​elE7A WT和W38A朝向结晶纤维素和无定形纤维素的活性。 W38A比WT朝向无定形纤维素更活跃,而其朝向结晶纤维素的活性仅为WT的十分之一。为了量化ubitate -4突变的效果,我们测量Trcel7a Wt,W40a和W38a的动力学参数朝向细胞 - 寡糖。酶和底物的所有组合显示出底物抑制,并且抑制常数的比较表明,TRP38残基增加了从子岩的负侧增加了基底摄入量(K_(ON)的速度)。这些结果表明TRP38残基在处理纤维素链中的还原末端进入催化隧道中的关键作用。

著录项

  • 来源
    《Journal of Applied Glycoscience》 |2021年第1期|19-29|共11页
  • 作者单位

    Department of Applied Life Sciences Faculty of Agriculture Shizuoka University 836 Ohya Suruga-ku Shizuoka 422-8529 Japan;

    School of Life Science and Technology Tokyo Institute of Technology B-62 4259 Nagatsuta-cho Midori-ku Yokohama 226-8501 Japan;

    School of Life Science and Technology Tokyo Institute of Technology B-62 4259 Nagatsuta-cho Midori-ku Yokohama 226-8501 Japan;

    School of Life Science and Technology Tokyo Institute of Technology B-62 4259 Nagatsuta-cho Midori-ku Yokohama 226-8501 Japan;

    VTT Technical Research Centre of Finland Ltd.Espoo FI-02044 VTT Finland;

    Faculty of Engineering Shinshu University 4-17-1 Wakasato Nagano City Nagano 380-8553 Japan Department of Biomaterials Sciences Graduate School of Agricultural and Life Sciences University of Tokyo 1-1-1 Yayoi Bunkyo-ku Tokyo 113-8657 Japan;

    VTT Technical Research Centre of Finland Ltd.Espoo FI-02044 VTT Finland;

    VTT Technical Research Centre of Finland Ltd.Espoo FI-02044 VTT Finland Department of Biomaterials Sciences Graduate School of Agricultural and Life Sciences University of Tokyo 1-1-1 Yayoi Bunkyo-ku Tokyo 113-8657 Japan;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    cellobiohydrolase; steady-state kinetics; processive reaction; Trichoderma reesei;

    机译:纤维脱硫酶;稳态动力学;加工反应;Trichoderma Reesei.;

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