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Simultaneous Detection of Salmonella, Listeria monocytogenes, and Staphylococcus aureus by Multiplex Real-Time PCR Assays Using High-Resolution Melting

机译:使用高分辨率熔解的多重实时PCR分析同时检测沙门氏菌,单核细胞增生性李斯特菌和金黄色葡萄球菌

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摘要

A method combining multiplex real-time polymerase chain reaction (PCR) with high-resolution melting (HRM) analysis for rapid and specific simultaneous detection of Salmonella, Listeria monocytogenes, and Staphylococcus aureus was developed. The method included a melting-curve analysis of products and was evaluated by specificity, sensitivity and reproducibility analyses. Sensitivity and reproducibility analyses was both conducted by genomic DNA extracted from serial dilutions for each target pathogen. Assays with artificially inoculated and naturally contaminated samples after enrichment were also conducted. In the specificity test, there was no nonspecific amplification of the 44 nontarget pathogens, whereas the actual T-m values were 79.38 +/- 0.14, 82.54 +/- 0.15, and 77.36 +/- 0.14 degrees C for Salmonella, L. monocytogenes, and S. aureus, respectively. The sensitivity of the method was 3.5x10(2) CFU ml(-1) for Salmonella and L. monocytogenes and 3.5x10(3) CFU ml(-1) for S. aureus. The coefficients of variation of Tm values ranged 0.51-1.03 % for Salmonella, 1.63-2.11 % for L. monocytogenes, and 0.75-2.17% for S. aureus in intraassay, and ranged 0.81-2.43% for Salmonella, 1.97-2.35 % for L. monocytogenes, and 0.93-3.93 % for S. aureus in interassay. The detection limit in artificially inoculated samples (n=50) was 5 CFU (25 g)(-1) food for the three tested pathogens. In the naturally contaminated samples (n=120), Salmonella DNA was detected by HRM, sequencing, and conventional culture-based methods at a positive rate of 25.00, 25.00, and 24.17 %, respectively; the corresponding rates for L. monocytogenes were 14.17, 14.17, and 14.17 %, respectively, while those for S. aureus were 16.7, 16.7, and 16.7 %, respectively.
机译:建立了一种结合实时荧光定量聚合酶链反应(PCR)和高分辨率熔解(HRM)分析的方法,用于沙门氏菌,单核细胞增生性李斯特菌和金黄色葡萄球菌的快速,特异同时检测。该方法包括产物的熔解曲线分析,并通过特异性,敏感性和可重复性分析进行了评估。敏感性和可重复性分析都是通过从每种目标病原体的系列稀释液中提取的基因组DNA进行的。还对富集后的人工接种和自然污染的样品进行了测定。在特异性测试中,没有44种非靶标病原体的非特异性扩增,而沙门氏菌,单核细胞增生李斯特氏菌和沙门氏菌的实际Tm值分别为79.38 +/- 0.14、82.54 +/- 0.15和77.36 +/- 0.14摄氏度。金黄色葡萄球菌分别。该方法对沙门氏菌和单核细胞增生李斯特菌的敏感性为3.5x10(2)CFU ml(-1),对金黄色葡萄球菌为3.5x10(3)CFU ml(-1)。在测定中,沙门氏菌的Tm值变异系数范围为0.51-1.03%,单核细胞增生李斯特氏菌的Tm值范围为1.63-2.11%,金黄色葡萄球菌的Tm值变异系数为0.75-2.17%,沙门氏菌的Tm值范围为0.81-2.43%,沙门氏菌范围为1.97-2.35%单核细胞增生李斯特菌,金黄色葡萄球菌在试验中占0.93-3.93%。对于三种被测病原体,人工接种的样品(n = 50)的检出限为5 CFU(25 g)(-1)食品。在自然污染的样本中(n = 120),通过HRM,测序和基于常规培养的方法检测到沙门氏菌DNA的阳性率分别为25.00%,25.00%和24.17%。单核细胞增生李斯特菌的相应发生率分别为14.17%,14.17和14.17%,而金黄色葡萄球菌的相应发生率分别为16.7%,16.7和16.7%。

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