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Tumor mutational burden standardization initiatives: Recommendations for consistent tumor mutational burden assessment in clinical samples to guide immunotherapy treatment decisions

机译:肿瘤突变负担标准化举措:临床样本中一致肿瘤突变负担评估的建议,以指导免疫治疗决策

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Abstract Characterization of tumors utilizing next‐generation sequencing methods, including assessment of the number of somatic mutations (tumor mutational burden [TMB]), is currently at the forefront of the field of personalized medicine. Recent clinical studies have associated high TMB with improved patient response rates and survival benefit from immune checkpoint inhibitors; hence, TMB is emerging as a biomarker of response for these immunotherapy agents. However, variability in current methods for TMB estimation and reporting is evident, demonstrating a need for standardization and harmonization of TMB assessment methodology across assays and centers. Two uniquely placed organizations, Friends of Cancer Research (Friends) and the Quality Assurance Initiative Pathology (QuIP), have collaborated to coordinate efforts for international multistakeholder initiatives to address this need. Friends and QuIP, who have partnered with several academic centers, pharmaceutical organizations, and diagnostic companies, have adopted complementary, multidisciplinary approaches toward the goal of proposing evidence‐based recommendations for achieving consistent TMB estimation and reporting in clinical samples across assays and centers. Many factors influence TMB assessment, including preanalytical factors, choice of assay, and methods of reporting. Preliminary analyses highlight the importance of targeted gene panel size and composition, and bioinformatic parameters for reliable TMB estimation. Herein, Friends and QuIP propose recommendations toward consistent TMB estimation and reporting methods in clinical samples across assays and centers. These recommendations should be followed to minimize variability in TMB estimation and reporting, which will ensure reliable and reproducible identification of patients who are likely to benefit from immune checkpoint inhibitors.
机译:摘要利用下一代测序方法的肿瘤表征,包括评估躯体突变数量(肿瘤突变[TMB]),目前处于个性化医学领域的最前沿。最近的临床研究具有相关的高TMB,具有改善的患者反应率和生存益处免受免疫检查点抑制剂的益处;因此,TMB作为这些免疫疗法的反应的生物标志物。然而,目前的TMB估计和报告方法的可变性是显而易见的,证明了对分析和中心的TMB评估方法的标准化和协调。两个独特的组织,癌症研究(朋友)和质量保证倡议病理学(Quip)合作,协同协调为国际多利益相关方倡导提供解决这种需求的努力。与若干学术中心,制药组织和诊断公司合作的朋友和Quip采用了互补,多学科方法,以提出基于证据的建议,以实现一致的TMB估计和在临床样本中跨越分析和中心的报告。许多因素会影响TMB评估,包括预级别因素,测定的选择以及报告方法。初步分析突出了靶向基因面板大小和组成的重要性,以及可靠的TMB估计的生物信息参数。在此,朋友和Quip建议在跨分析和中心的临床样本中向一致的TMB估计和报告方法提出建议。应遵循这些建议,以尽量减少TMB估算和报告的可变性,这将确保可从免疫检查点抑制剂受益的患者可靠和可重复的鉴定。

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