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Tumor mutational burden standardization initiatives: Recommendations for consistent tumor mutational burden assessment in clinical samples to guide immunotherapy treatment decisions

机译:肿瘤突变负担标准化举措:关于在临床样本中进行一致的肿瘤突变负担评估的建议以指导免疫疗法的治疗决策

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摘要

Characterization of tumors utilizing next‐generation sequencing methods, including assessment of the number of somatic mutations (tumor mutational burden [TMB]), is currently at the forefront of the field of personalized medicine. Recent clinical studies have associated high TMB with improved patient response rates and survival benefit from immune checkpoint inhibitors; hence, TMB is emerging as a biomarker of response for these immunotherapy agents. However, variability in current methods for TMB estimation and reporting is evident, demonstrating a need for standardization and harmonization of TMB assessment methodology across assays and centers. Two uniquely placed organizations, Friends of Cancer Research (Friends) and the Quality Assurance Initiative Pathology (QuIP), have collaborated to coordinate efforts for international multistakeholder initiatives to address this need. Friends and QuIP, who have partnered with several academic centers, pharmaceutical organizations, and diagnostic companies, have adopted complementary, multidisciplinary approaches toward the goal of proposing evidence‐based recommendations for achieving consistent TMB estimation and reporting in clinical samples across assays and centers. Many factors influence TMB assessment, including preanalytical factors, choice of assay, and methods of reporting. Preliminary analyses highlight the importance of targeted gene panel size and composition, and bioinformatic parameters for reliable TMB estimation. Herein, Friends and QuIP propose recommendations toward consistent TMB estimation and reporting methods in clinical samples across assays and centers. These recommendations should be followed to minimize variability in TMB estimation and reporting, which will ensure reliable and reproducible identification of patients who are likely to benefit from immune checkpoint inhibitors.
机译:利用下一代测序方法表征肿瘤,包括评估体细胞突变的数量(肿瘤突变负担[TMB]),目前在个性化医学领域处于最前沿。最近的临床研究将高TMB与提高的患者反应率和免疫检查点抑制剂的生存获益相关联。因此,TMB逐渐成为这些免疫治疗剂反应的生物标志物。但是,目前用于TMB估算和报告的方法存在明显差异,这表明需要在各个检测和中心之间对TMB评估方法进行标准化和统一。癌症研究之友组织(Friends)和质量保证倡议组织病理学(QuIP)这两个独特的组织已经合作协调国际多利益相关方倡议的工作,以解决这一需求。与几个学术中心,制药组织和诊断公司合作的Friends和QuIP已采用互补的,多学科的方法,以期提出基于证据的建议,以实现在各测定和中心的临床样品中一致的TMB估计和报告。许多因素都会影响TMB评估,包括分析前因素,分析方法选择和报告方法。初步分析强调了靶向基因组大小和组成以及生物信息学参数对于可靠TMB估计的重要性。在这里,Friends和QuIP提出了关于跨测定和中心的临床样品中一致的TMB估计和报告方法的建议。应当遵循这些建议,以最大程度地减少TMB估算和报告中的差异,这将确保可靠且可重复的鉴定可能受益于免疫检查点抑制剂的患者。

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