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Validation of Lag Time and Growth Rate Models for Salmonella Typhimurium: Acceptable Prediction Zone Method

机译:鼠伤寒沙门氏菌滞后时间和增长率模型的验证:可接受的预测区方法

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The prediction bias (B_f) and accuracy (A_f) factors are the most widely used measures of performance of predictive models for food pathogens. However, B_f and A_f have limitations that can produce inaccurate assessments of model performance. Consequently, an objective of the current study was to develop a method for quantifying model performance that overcomes limitations of B_f and A_f Performance of published lag time and growth rate models for Salmonella Typhimurium were evaluated for data used in model development and for data not used in model development but that were inside (interpolation) or outside (extrapolation) the response surface of the models. In addition, performance of published models for growth of Escherichia coli O157:H7 was evaluated for data used in model development. Observed and predicted values were compared using B_f, A_f, and pRE, a new performance factor that quantified the proportion of relative errors (RE) in an acceptable prediction zone from an RE of -0.3 (fail-safe) to 0.15 (fail-dangerous). A decision diagram based on criteria for test data and model performance was used to validate the models. When B_f and A_f were used to quantify model performance, all models were validated. In contrast, when pRE was used to evaluate model performance, 2 models for S. Typhimurium and both models for E. coli O157:H7 failed validation. Overall, pRE was a more sensitive and reliable indicator of model performance than B_f and A_f because unacceptable pRE, which indicated a performance problem, were obtained for 8 of 20 evaluations, all of which had acceptable B_f and A_f. A limitation of pRE was the inability to distinguish between global and regional prediction problems. However, when used in combination with an RE plot, pRE provided a complete evaluation of model performance that overcame limitations of B_f and A_f.
机译:预测偏差(B_f)和准确性(A_f)因素是用于食物病原体预测模型性能的最广泛使用的度量。但是,B_f和A_f具有局限性,可能会导致模型性能的评估不准确。因此,本研究的目的是开发一种克服B_f和A_f局限性的量化模型性能的方法,针对鼠伤寒沙门氏菌的已发布滞后时间和增长率模型的性能进行评估,以评估模型开发中使用的数据和未用于模型的数据。模型开发,但在模型的响应面内(内插)或外(外推)。此外,针对模型开发中使用的数据评估了已发表的大肠杆菌O157:H7生长模型的性能。使用B_f,A_f和pRE比较观察和预测的值,B_f,A_f和pRE是一种新的性能因子,可以将可接受的预测区域中的相对误差(RE)的比例从-0.3(故障安全)更改为0.15(故障危险) )。基于测试数据和模型性能标准的决策图用于验证模型。当使用B_f和A_f量化模型性能时,所有模型均得到验证。相反,当使用pRE评估模型性能时,鼠伤寒沙门氏菌的2个模型和大肠杆菌O157:H7的两个模型均未通过验证。总体而言,pRE是模型性能比B_f和A_f更为敏感和可靠的指标,因为对于20个评估中有8个获得了不可接受的pRE,这表明存在性能问题,所有评估均具有可接受的B_f和A_f。 pRE的局限性是无法区分全球和区域预测问题。但是,与RE图结合使用时,pRE提供了对模型性能的完整评估,克服了B_f和A_f的限制。

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