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Detection of Legionellae in Hospital Water Samples by Quantitative Real-Time LightCycler PCR

机译:实时荧光定量PCR技术检测医院水样中的军团菌

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Contamination of hospital water systems with legionellae is a well-known cause of nosocomial legionellosis. We describe a new real-time LightCycler PCR assay for quantitative determination of legionellae in potable water samples. Primers that amplify both a 386-bp fragment of the 16S rRNA gene from Legionellaspp. and a specifically cloned fragment of the phage lambda, added to each sample as an internal inhibitor control, were used. The amplified products were detected by use of a dual-color hybridization probe assay design and quantified with external standards composed ofLegionella pneumophila genomic DNA. The PCR assay had a sensitivity of 1 fg of Legionella DNA (i.e., less than one Legionella organism) per assay and detected 44Legionella species and serogroups. Seventy-seven water samples from three hospitals were investigated by PCR and culture. The rates of detection of legionellae were 98.7% (76 of 77) by the PCR assay and 70.1% (54 of 77) by culture; PCR inhibitors were detected in one sample. The amounts of legionellae calculated from the PCR results were associated with the CFU detected by culture (r= 0.57; P L. pneumophila is the main cause of legionellosis, we further developed a quantitativeL. pneumophila-specific PCR assay targeting the macrophage infectivity potentiator (mip) gene, which codes for an immunophilin of the FK506 binding protein family. All but one of the 16S rRNA gene PCR-positive water samples were also positive in the mip gene PCR, and the results of the two PCR assays were correlated. In conclusion, the newly developedLegionella genus-specific and L. pneumophila species-specific PCR assays proved to be valuable tools for investigation of Legionella contamination in potable water systems.
机译:军团菌污染医院供水系统是医院军团菌病的众所周知原因。我们描述了一种新的实时LightCycler PCR测定法,用于定量测定饮用水样品中的军团菌。扩增来自军团菌的16S rRNA基因的386 bp片段的引物。然后使用特异性克隆的噬菌体λ片段,将其作为内部抑制剂对照加入到每个样品中。通过使用双色杂交探针测定设计检测扩增的产物,并用由嗜肺军团菌基因组DNA组成的外标定量。每个测定的PCR分析灵敏度为1 fg军团菌DNA(即少于一种军团菌),并检测到44种军团菌物种和血清群。通过PCR和培养对三家医院的77个水样进行了调查。 PCR检测的军团菌检出率为98.7%(77个中的76个),培养的检出率为70.1%(77个中的54个)。在一个样品中检测到PCR抑制剂。从PCR结果计算出的军团菌数量与培养物检测到的CFU有关(r = 0.57;肺炎支原体是军团菌病的主要原因,我们进一步开发了针对巨噬细胞感染增强剂的定量肺炎支原体特异性PCR检测法( mip)基因,它编码FK506结合蛋白家族的亲免蛋白,除16S rRNA基因PCR阳性的水样之一外,其他所有样品在mip基因PCR中也都是阳性的,这两个PCR检测的结果是相关的。结论是,新近开发的军团菌属特异性和嗜肺军团菌物种特异性PCR检测方法被证明是研究饮用水系统中军团菌污染的有价值的工具。

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