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Detection of Legionellae in Hospital Water Samples by Quantitative Real-Time LightCycler PCR

机译:实时荧光定量PCR技术检测医院水样中的军团菌

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Contamination of hospital water systems with legionellae is a well-known cause of nosocomial legionellosis. We describe a new real-time LightCycler PCR assay for quantitative determination of legionellae in potable water samples. Primers that amplify both a 386-bp fragment of the 16S rRNA gene from Legionella spp. and a specifically cloned fragment of the phage lambda, added to each sample as an internal inhibitor control, were used. The amplified products were detected by use of a dual-color hybridization probe assay design and quantified with external standards composed of Legionella pneumophila genomic DNA. The PCR assay had a sensitivity of 1 fg of Legionella DNA (i.e., less than one Legionella organism) per assay and detected 44 Legionella species and serogroups. Seventy-seven water samples from three hospitals were investigated by PCR and culture. The rates of detection of legionellae were 98.7% (76 of 77) by the PCR assay and 70.1% (54 of 77) by culture; PCR inhibitors were detected in one sample. The amounts of legionellae calculated from the PCR results were associated with the CFU detected by culture (r = 0.57; P < 0.001), but PCR results were mostly higher than the culture results. Since L. pneumophila is the main cause of legionellosis, we further developed a quantitative L. pneumophila-specific PCR assay targeting the macrophage infectivity potentiator (mip) gene, which codes for an immunophilin of the FK506 binding protein family. All but one of the 16S rRNA gene PCR-positive water samples were also positive in the mip gene PCR, and the results of the two PCR assays were correlated. In conclusion, the newly developed Legionella genus-specific and L. pneumophila species-specific PCR assays proved to be valuable tools for investigation of Legionella contamination in potable water systems.
机译:军团菌污染医院供水系统是医院军团菌病的众所周知原因。我们描述了一种新的实时LightCycler PCR分析法,用于定量测定饮用水样品中的军团菌。扩增来自军团菌属物种的16S rRNA基因的386 bp片段的引物。然后使用特异性克隆的噬菌体λ片段,将其作为内部抑制剂对照加入到每个样品中。通过使用双色杂交探针测定设计检测扩增的产物,并用由嗜肺军团杆菌基因组DNA组成的外标定量。每个测定的PCR检测灵敏度为1 fg军团菌DNA(即少于一种军团菌),并检测到44种军团菌物种和血清群。通过PCR和培养对三家医院的77个水样进行了调查。通过PCR测定,军团菌的检出率为98.7%(77例中的76例),通过培养检出率为70.1%(77例中的54例)。在一个样品中检测到PCR抑制剂。从PCR结果计算出的军团菌数量与培养物检测到的CFU相关(r = 0.57; P <0.001),但PCR结果大多高于培养物结果。由于嗜肺乳杆菌是军团菌病的主要原因,因此我们进一步开发了针对巨噬细胞感染性增强剂(mip)基因的定量嗜肺乳杆菌特异性PCR检测方法,该基因编码FK506结合蛋白家族的亲免蛋白。除1个16S rRNA基因PCR阳性水样外,其他所有样品在mip基因PCR中也均为阳性,并且两个PCR测定的结果相关。总之,新开发的军团菌属特异性和嗜肺军团菌物种特异性PCR检测方法被证明是研究饮用水系统中军团菌污染的有价值的工具。

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