LaneRuler: Automated Lane Tracking for DNA Electrophoresis Gel Images

Wong R. T. F.; Flibotte S.; Corbett R.; Saeedi P.; Jones S. J. M.; Marra M. A.; Schein J. E.; Birol I.

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LaneRuler: Automated Lane Tracking for DNA Electrophoresis Gel Images

机译：LaneRuler：DNA电泳凝胶图像的自动泳道跟踪

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摘要

We present a novel method for correctly identifying and straightening one dimensional agarose electrophoretic lanes. Our method has been shown to yield comparable accuracy with manual lane tracking results, and to successfully process 98% of DNA fingerprinting gels with no human intervention.

机译：我们提出了一种正确识别和拉直一维琼脂糖电泳泳道的新颖方法。我们的方法已显示出与手动车道跟踪结果相当的准确性，并且无需人工干预即可成功处理98％的DNA指纹凝胶。

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来源
《Automation Science and Engineering, IEEE Transactions on》 |2010年第3期|P.706-708|共3页
作者
Wong R. T. F.; Flibotte S.; Corbett R.; Saeedi P.; Jones S. J. M.; Marra M. A.; Schein J. E.; Birol I.;
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作者单位

Canada's Michael Smith Genome Sciences Centre, Vancouver, Canada;

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关键词
Automation; electrophoresis; image processing; image analysis;

机译：自动化;电泳;图像处理;图像分析;

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专利

1. A new algorithm for lane detection and tracking on pulsed field gel electrophoresis images [J] . Rezaei Mohammad, Amiri Mahmood, Mohajeri Parviz, Chemometrics and Intelligent Laboratory Systems . 2016,第Null期

机译：脉冲场凝胶电泳图像的车道检测和跟踪新算法
2. Lane detection and tracking in PCR gel electrophoresis images [J] . Park Sang Cheol, Na In Seop, Han Tae Ho, Computers and Electronics in Agriculture . 2012,第Null期

机译：PCR凝胶电泳图像中的泳道检测和跟踪
3. Semiautomatic detection of lanes and bands in DNA gel electrophoresis images [J] . Ashraf K. Helmy, Ghada S. El-Tawel Journal of Biomedical Science and Engineering . 2013,第1期

机译：半自动检测DNA凝胶电泳图像中的泳道和条带
4. Identification of column edges of DNA fragments by using K-means clustering and mean algorithm on lane histograms of DNA agarose gel electrophoresis images [C] . Muhammed Kamil Turan, Eftal Sehirli, Abdullah Elen, International Conference on Digital Image Processing . 2015

机译：利用K-均值聚类和DNA琼脂糖凝胶电泳图像泳道直方图的均值算法识别DNA片段的柱边缘
5. Novel detection schemes and automated image analysis algorithms for planar chromatography and gel electrophoresis. [D] . Koutny, Lance Bryant. 1992

机译：用于平面色谱和凝胶电泳的新型检测方案和自动图像分析算法。
6. Tracking bacterial DNA replication forks in vivo by pulsed field gel electrophoresis. [O] . M Ohki, C L Smith 1989

机译：通过脉冲场凝胶电泳在体内跟踪细菌DNA复制叉。
7. Semiautomatic detection of lanes and bands in DNA gel electrophoresis images [O] . Ashraf K. Helmy, Ghada S. El-Tawel 2013

机译：半自动检测DNA凝胶电泳图像中的泳道和条带

LaneRuler: Automated Lane Tracking for DNA Electrophoresis Gel Images

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