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Purification and characterization of an extracellular β-xylosidase from Pseudozyma hubeiensis NCIM 3574 (PhXyl) an unexplored yeast

机译:湖北假单胞菌NCIM 3574(PhXyl)的细胞外β-木糖苷酶的纯化和鉴定

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摘要

This paper reports on the production of β-xylosidase from an unexplored yeast, Pseudozyma hubeinsis. The expression of this enzyme could be induced by beech wood xylan when the yeast was grown at 27 °C. The enzyme was purified to homogeneity as a glycoprotein with 23 % glycosylation. The purification protocol involved ammonium sulphate precipitation, QAE-Sephadex A50 ion exchange chromatography and sephacryl-200 column chromatography which resulted in 8.3-fold purification with 53.12 % final recovery. The purified enzyme showed prominent single band on SDS-PAGE. It is a monomeric protein of 110 kDa molecular weight confirmed by SDS-PAGE followed by MALDI-TOF mass spectrometry (112.3 kDa). The enzyme was optimally active at 60 °C and pH 4.5 and stable at pH range (4–9) and at 50 °C for 4 h. Chemical modification studies revealed that active site of the purified enzyme comprised of carboxyl, tyrosine and tryptophan residues. The carboxyl residue is involved in catalysis and tryptophan residue is solely involved in substrate binding. The best match from the search of the NCBInr database was with gi|808364558 glycoside hydrolase of Pseudozyma hubeiensis SY62 with 26 % sequence coverage confirming that it is a glycoside hydrolase/beta-glucosidase. From the search of customized SWISSPROT database, it was revealed that SWISSPROT does not contain any entries that are similar to the purified enzyme.Electronic supplementary materialThe online version of this article (doi:10.1186/s13568-016-0243-7) contains supplementary material, which is available to authorized users.
机译:本文报道了未开发的酵母假单胞菌产生β-木糖苷酶的情况。当酵母在27°C下生长时,山毛榉木木聚糖可以诱导该酶的表达。该酶被纯化为具有23%糖基化的糖蛋白同质。纯化方案涉及硫酸铵沉淀,QAE-Sephadex A50离子交换色谱和sephacryl-200柱色谱,可纯化8.3倍,最终回收率为53.12%。纯化的酶在SDS-PAGE上显示突出的单条带。它是通过SDS-PAGE和MALDI-TOF质谱(112.3kDa)确认的分子量为110 kDa的单体蛋白。该酶在60°C和pH 4.5时具有最佳活性,并且在pH范围(4–9)和50°C下稳定4小时。化学修饰研究表明,纯化的酶的活性位点由羧基,酪氨酸和色氨酸残基组成。羧基残基参与催化,而色氨酸残基仅参与底物结合。通过NCBInr数据库搜索得到的最佳匹配是gi | 808364558湖北假单胞菌SY62的糖苷水解酶,其序列覆盖率为26%,证实它是糖苷水解酶/β-葡萄糖苷酶。从定制的SWISSPROT数据库搜索中发现,SWISSPROT不包含与纯化酶相似的任何条目。电子补充材料本文的在线版本(doi:10.1186 / s13568-016-0243-7)包含补充材料,可供授权用户使用。

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