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PCR-Based Genotyping of Epidemic and Preepidemic Trichoderma Isolates Associated with Green Mold of Agaricus bisporus

机译:基于PCR的双孢蘑菇绿色霉菌的流行和流行前木霉分离株的基因分型

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摘要

We used randomly amplified polymorphic DNA (RAPD)-PCR to estimate genetic variation among isolates of Trichoderma associated with green mold on the cultivated mushroom Agaricus bisporus. Of 83 isolates examined, 66 were sampled during the recent green mold epidemic, while the remaining 17 isolates were collected just prior to the epidemic and date back to the 1950s. Trichoderma harzianum biotype 4 was identified by RAPD analysis as the cause of almost 90% of the epidemic-related episodes of green mold occurring in the major commercial mushroom-growing region in North America. Biotype 4 was more closely allied to T. harzianum biotype 2, the predominant pathogenic genotype in Europe, than to the less pathogenic biotype 1 and Trichoderma atroviride (formerly T. harzianum biotype 3). No variation in the RAPD patterns was observed among the isolates within biotype 2 or 4, suggesting that the two pathogenic biotypes were populations containing single clones. Considerable genetic variation, however, was noted among isolates of biotype 1 and T. atroviride from Europe. Biotype 4 was not represented by the preepidemic isolates of Trichoderma as determined by RAPD markers and PCR amplification of an arbitrary DNA sequence unique to the genomes of biotypes 2 and 4. Our findings suggest that the onset of the green mold epidemic in North America resulted from the recent introduction of a highly virulent genotype of the pathogen into cultivated mushrooms.
机译:我们使用随机扩增的多态性DNA(RAPD)-PCR来估计与栽培蘑菇双孢蘑菇上的绿色霉菌相关的木霉菌株之间的遗传变异。在检查的83个分离株中,有66个是在最近的绿色霉菌流行期间取样的,而其余17个分离株是在该流行之前采集的,可追溯到1950年代。通过RAPD分析,哈茨木霉4型生物型被确定为导致90%的与绿霉病有关的流行病发作的原因,该病发生在北美主要的商业蘑菇种植地区。生物型4与欧洲的主要致病基因型哈茨木霉生物型2更紧密相关,而与病原性较低的生物型1和木霉阿托韦利德(以前的哈茨木霉生物型3)密切相关。在生物型2或4中的分离株之间未观察到RAPD模式的变化,表明两种病原性生物型是仅包含一个克隆的种群。然而,在来自欧洲的生物型1和Atroviride T.分离株中发现了相当大的遗传变异。通过RAPD标记和PCR扩增的生物型2和4的基因组特有的任意DNA序列,无法确定木霉的流行前分离株代表4型生物。我们的发现表明,北美的绿色霉菌流行是由最近将高毒力基因型的病原体引入栽培蘑菇中。

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