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Real-time adaptive information-theoretic optimization of neurophysiology experiments

机译:神经生理实验的实时自适应信息 - 理论优化

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Adaptively optimizing experiments can significantly reduce the number of trials needed to characterize neural responses using parametric statistical models. However, the potential for these methods has been limited to date by severe computational challenges: choosing the stimulus which will provide the most information about the (typically high-dimensional) model parameters requires evaluating a high-dimensional integration and optimization in near-real time. Here we present a fast algorithm for choosing the optimal (most informative) stimulus based on a Fisher approximation of the Shannon information and specialized numerical linear algebra techniques. This algorithm requires only low-rank matrix manipulations and a one-dimensional linesearch to choose the stimulus and is therefore efficient even for high-dimensional stimulus and parameter spaces; for example, we require just 15 milliseconds on a desktop computer to optimize a 100-dimensional stimulus. Our algorithm therefore makes real-time adaptive experimental design feasible. Simulation results show that model parameters can be estimated much more efficiently using these adaptive techniques than by using random (nonadaptive) stimuli. Finally, we generalize the algorithm to efficiently handle both fast adaptation due to spike-history effects and slow, non-systematic drifts in the model parameters.
机译:自适应优化实验可以显着减少使用参数统计模型表征神经响应所需的试验的数量。然而,这些方法的潜力仅限于迄今为止的严重计算挑战:选择将提供有关(通常高维)模型参数的最多信息的刺激需要在近实时评估高维集成和优化。在这里,我们提出了一种基于Shannon信息和专用数值线性代数技术的Fisher近似来选择最佳(大多数信息)刺激的快速算法。该算法仅需要低秩矩阵操纵和一维线路,以选择刺激,因此即使对于高维刺激和参数空间也有效;例如,我们在台式计算机上只需要15毫秒,以优化100维刺激。因此,我们的算法使实时自适应实验设计可行。仿真结果表明,可以使用这些自适应技术更有效地估计模型参数而不是使用随机(非接受)刺激。最后,我们概括了算法,以有效地处理模型参数中的峰值历史效果和慢,非系统漂移的快速适应。

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