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Breast cancer classification using digital biopsy histopathology images through transfer learning

机译:通过转移学习使用数字活检组织病理学图像的乳腺癌分类

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Breast cancer (BC) infection, which is peculiar to women, brings about the high rate of deaths among women in every part of the world. The early investigation of BC has minimized the severe effects of cancer as compared to the last stage diagnosis. Doctors for diagnostic tests usually suggest the medical imaging modalities like mammograms or biopsy histopathology (Hp) images. However, Hp image analysis gives doctors more confidence to diagnose BC as compared to mammograms. Many studies used Hp images to develop BC classification models to assist doctors in early BC diagnosis. However, these models lack better and reliable results in terms of reporting multiple performance evaluation metrics. Therefore, the goal of this study is to create a reliable, more accurate model that consumes minimum resources by using transfer learning based convolution neural network model. The proposed model uses the trained model after fine tuning, hence requires less number of images and can show better results on minimum resources. BreakHis dataset, which is available publicly has been employed in overall experiments in this research. BreakHis dataset is separated into training, testing, and validation for the experimentation. In addition, the dataset for training was augmented followed by stain normalization. By using the concept of transfer learning (TL), AleNext was retained after fine-tuning the last layer for binary classification like benign and malignant. Afterward, preprocessed images are fed into the TL based model for training. The model training was performed many times by changing the hyperparameters randomly until the minimum validation loss was achieved. Now the trained model was used for feature extraction. The extracted features were further evaluated by using six ML classifiers (i.e. softmax, Decision tree, Naive Bayes, Linear discriminant analysis, Support vector machine, k-nearest neighbor) through five performance measures such as precision, F-measure, accuracy, specificity, and sensitivity for experimental evaluation. The softmax has outperformed among all classifiers. Furthermore, to reduce the wrong prediction, a misclassification reducing (MR) algorithm was developed. After using the MR algorithm the proposed model produced better and reliable results. The observed accuracy, specificity, sensitivity, precision and F measure are 81.25%, 77.47%, 82.49%, 91.70%, and 86.80% respectively. These results show that the proposed TL based model along with misclassification reduction algorithm produced comparable results to the current baseline models. Hence, the expected model could serve as a second opinion for BC classification in any healthcare center.
机译:乳腺癌(BC)感染,这是妇女特有的,在世界各地的妇女中带来了高的死亡率。与最后阶段的诊断相比,BC的早期调查最小化了癌症的严重影响。用于诊断测试的医生通常建议乳房X光检查或活检组织病理学(HP)图像等医学成像模态。然而,与乳房图相比,HP图像分析使医生更有信心诊断BC。许多研究使用HP图像开发BC分类模型,以帮助早期BC诊断中的医生。然而,这些模型在报告多个性能评估指标方面缺乏更好和可靠的结果。因此,本研究的目标是通过使用基于传输学习的卷积神经网络模型来创建一种可靠的更准确的模型,该模型消耗最低资源。所提出的模型在微调后使用训练的模型,因此需要较少数量的图像,并且可以在最小资源上显示更好的结果。 Breakhis DataSet公开可用,在本研究中的整体实验中已受雇。 Breakhis DataSet分为实验的培训,测试和验证。此外,用于培训的数据集被增强,然后进行染色标准化。通过使用转移学习(TL)的概念,在微调良性分类的最后一层之后,Alenext被保留,如良性和恶性。之后,预处理图像被馈送到基于TL的训练模型中。通过随机改变近似参数,直到实现最小验证损失,模型训练很多次进行。现在训练的模型用于特征提取。通过使用六种分类器(即Softmax,决策树,幼稚贝叶斯,线性判别分析,支持向量机,K最近邻居)进一步评估提取的特征通过五种性能措施,例如精度,F测量,精度,特异性,和实验评估的敏感性。 Softmax在所有分类器中都不表现。此外,为了减少错误的预测,开发了错误分类减少(MR)算法。使用MR算法后,所提出的模型产生了更好且可靠的结果。观察到的准确性,特异性,敏感性,精度和F度量分别为81.25%,77.47%,82.49%,91.70%和86.80%。这些结果表明,所提出的基于TL基于TL的模型以及错误分类还原算法产生了当前基线模型的可比结果。因此,预期模型可以作为任何医疗保健中心的BC分类的第二个意见。

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