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Single-Cell Analysis of Microbial Production Strains in Microfluidic Bioreactors

机译:微流控生物反应器中微生物产生菌的单细胞分析

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摘要

Industrial biotechnology is concerned with the sustainable production of, forexample, fine and bulk chemicals, pharmaceuticals and proteins by utilizingmicroorganisms for the conversion of renewable carbon sources. Well known examplesinclude the production of amino acids by Corynebacterium glutamicum at a million tonscale per year worldwide, or the recombinant production of insulin by Escherichia coli.Growth and productivity of the underlying host microorganisms are two keyperformance indicators in biotechnological production processes. Assuming isogenicstarting populations, optimal reactor control and mixing, a uniform cell behavior duringgrowth might be expected. However, as confirmed in recent years, isogenic bacterialpopulations can be physiologically heterogeneous. Obviously, there is a strong demandto unravel microbial population heterogeneity, understand its origin and gain knowledgeon its impact on large scale biotechnological production. Therefore, new analyticaltechniques addressing single-cell behavior are the key for further optimization.In particular, state-of-the-art microfluidic cultivation systems facilitating single-cellresolution and accurate environmental control over long time periods at the same time,offer completely new experimental assays on microbial populations. In contrast toconventional systems, for example, fluorescence activated cell sorting, microfluidiccultivations enable the analysis of cell dynamics by automated time-lapse microscopywith full spatio-temporal resolution.The aim of the present thesis was to develop and establish a new microfluidicplatform technology for microbial single-cell analysis in order to address key concernson population heterogeneity and reactor inhomogeneity in industrial biotechnology.Several unique single-cell cultivation chips were successfully fabricated and validatedwith a variety of industrially applied microorganisms. Each device contained up to severalthousand micrometer sized cultivation structures in parallel intended for high-throughputanalysis of single cells and isogenic microcolonies
机译:工业生物技术涉及通过利用微生物转化可再生碳源来可持续生产例如精细和散装化学品,药物和蛋白质。众所周知的例子包括全世界每年以百万吨级规模的谷氨酸棒状杆菌生产氨基酸,或通过大肠杆菌重组生产胰岛素。潜在宿主微生物的生长和生产力是生物技术生产过程中的两个关键性能指标。假设等基因起始种群,最佳反应器控制和混合,生长过程中细胞行为均匀。然而,正如近年来所证实的,同基因细菌种群可能在生理上是异质的。显然,强烈需要揭开微生物种群异质性,了解其起源并了解其对大规模生物技术生产的影响的知识。因此,解决单细胞行为的新分析技术是进一步优化的关键。特别是最先进的微流控培养系统可在长时间内促进单细胞分辨率和准确的环境控制,并提供全新的实验微生物种群测定。与常规系统相比,例如荧光激活的细胞分选,微流控培养能够通过具有完整的时空分辨率的自动延时显微镜来分析细胞动力学。本发明的目的是开发和建立一种新的用于微生物单菌的微流控平台技术。细胞分析以解决工业生物技术中有关种群异质性和反应器不均匀性的关键问题。成功地制造了几种独特的单细胞培养芯片,并用多种工业应用微生物进行了验证。每个设备包含多达数千微米的并行培养结构,旨在对单细胞和等基因微菌落进行高通量分析

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    Grünberger Alexander;

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  • 年度 2014
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  • 原文格式 PDF
  • 正文语种 eng
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