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High prevalence of hepatitis e virus in swedish moose - A phylogenetic characterization and comparison of the virus from different regions

机译:瑞典麋鹿中戊型肝炎病毒的高流行-不同地区病毒的系统发育特征和比较

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摘要

BackgroundHepatitis E virus (HEV) infects a range of species, including humans, pigs, wild boars and deer. Zoonotic transmission may contribute to the high HEV seroprevalence in the human population of many countries. A novel divergent HEV from moose (Alces alces) in Sweden was recently identified by partial genome sequencing. Since only one strain was found, its classification within the HEV family, prevalence in moose and zoonotic potential was unclear. We therefore investigated samples from 231 moose in seven Swedish counties for HEV, and sequenced a near complete moose HEV genome. Phylogenetic analysis to classify this virus within the family Hepeviridae and to explore potential host specific determinants was performed.Methods and FindingsThe HEV prevalence of moose was determined by PCR (marker for active infection) and serological assays (marker of past infection) of sera and 51 fecal samples from 231 Swedish moose. Markers of active and past infection were found in 67 (29%) animals, while 34 (15%) were positive for HEV RNA, 43 (19%) were seropositive for anti-HEV antibodies, and 10 (4%) had both markers. The number of young individuals positive for HEV RNA was larger than for older individuals, and the number of anti-HEV antibody positive individuals increased with age. The high throughput sequenced moose HEV genome was 35-60% identical to existing HEVs. Partial ORF1 sequences from 13 moose strains showed high similarity among them, forming a distinct monophyletic clade with a common ancestor to HEV genotype 1-6 group, which includes members known for zoonotic transmission.ConclusionsThis study demonstrates a high frequency of HEV in moose in Sweden, with markers of current and past infection demonstrated in 30% of the animals. Moose is thus an important animal reservoir of HEV. The phylogenetic relationship demonstrated that the moose HEV belonged to the genotype 1-6 group, which includes strains that also infect humans, and therefore may signify a potential for zoonotic transmission of this HEV.
机译:背景戊型肝炎病毒(HEV)感染多种物种,包括人类,猪,野猪和鹿。人畜共患疾病的传播可能导致许多国家人口中高HEV血清阳性率。最近通过部分基因组测序鉴定了一种来自瑞典驼鹿(Alces alces)的新型发散型HEV。由于仅发现一种菌株,因此尚不清楚其在HEV家族中的分类,驼鹿的患病率和人畜共患病潜力。因此,我们调查了瑞典7个县的231只麋鹿的HEV样本,并对几乎完整的麋鹿HEV基因组进行了测序。方法和结果进行了系统发育分析,以将该病毒分类为Hepeviridae家族并探索潜在的宿主特异性决定因素。 231瑞典麋的粪便样本。在67(29%)只动物中发现了活动感染和既往感染的标志物,而HEV RNA阳性的有34(15%),抗HEV抗体的血清阳性的有43(19%),两种标志物都有10(4%)的阳性。 HEV RNA阳性的年轻个体的数量大于年龄较大的个体,并且抗HEV抗体阳性的个体的数量随着年龄的增长而增加。高通量测序的驼鹿HEV基因组与现有HEV的35-60%相同。来自13个驼鹿菌株的部分ORF1序列之间具有高度相似性,形成了与HEV 1-6基因型组相同祖先的独特单系进化枝,其中包括已知的人畜共患病传播成员。 ,其中有30%的动物表现出当前和过去感染的标志。因此,驼鹿是戊型肝炎病毒的重要动物库。系统发育关系表明,驼鹿HEV属于基因型1-6组,其中包括也能感染人类的​​菌株,因此可能表明该HEV发生了人畜共患性传播。

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