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Canine Olfactory Detection of a Non-Systemic Phytobacterial Citrus Pathogen of International Quarantine Significance

机译:犬嗅觉检测非全身性植物植物柑橘类柑橘病原体的国际检疫意义

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摘要

For millennia humans have benefitted from application of the acute canine sense of smell to hunt, track and find targets of importance. In this report, canines were evaluated for their ability to detect the severe exotic phytobacterial arboreal pathogen Xanthomonas citri pv. citri (Xcc), which is the causal agent of Asiatic citrus canker (Acc). Since Xcc causes only local lesions, infections are non-systemic, limiting the use of serological and molecular diagnostic tools for field-level detection. This necessitates reliance on human visual surveys for Acc symptoms, which is highly inefficient at low disease incidence, and thus for early detection. In simulated orchards the overall combined performance metrics for a pair of canines were 0.9856, 0.9974, 0.9257 and 0.9970, for sensitivity, specificity, precision, and accuracy, respectively, with 1–2 s/tree detection time. Detection of trace Xcc infections on commercial packinghouse fruit resulted in 0.7313, 0.9947, 0.8750, and 0.9821 for the same performance metrics across a range of cartons with 0–10% Xcc-infected fruit despite the noisy, hot and potentially distracting environment. In orchards, the sensitivity of canines increased with lesion incidence, whereas the specificity and overall accuracy was >0.99 across all incidence levels; i.e., false positive rates were uniformly low. Canines also alerted to a range of 1–12-week-old infections with equal accuracy. When trained to either Xcc-infected trees or Xcc axenic cultures, canines inherently detected the homologous and heterologous targets, suggesting they can detect Xcc directly rather than only volatiles produced by the host following infection. Canines were able to detect the Xcc scent signature at very low concentrations (10,000× less than 1 bacterial cell per sample), which implies that the scent signature is composed of bacterial cell volatile organic compound constituents or exudates that occur at concentrations many fold that of the bacterial cells. The results imply that canines can be trained as viable early detectors of Xcc and deployed across citrus orchards, packinghouses, and nurseries.
机译:对于Millennia人类有益于应用急性犬味道的嗅觉,追踪并找到重要的目标。在本报告中,评估犬的能力检测严重的异国植物植物植物病原体Xanthomonas Citri PV。 Citri(XCC),即亚洲柑橘类溃疡癌(ACC)的因果剂。由于XCC仅导致局部病变,感染是非系统性的,因此限制了使用血清学和分子诊断工具进行场级检测的使用。这需要依赖于ACC症状的人类视觉调查,其在低疾病发病率下具有高度低效,从而进行早期检测。在模拟的果园中,一对犬的整体组合性能指标分别为0.9856,0.9974,0.9257和0.9970,分别具有1-2秒的检测时间,特异性,精度和精度分别为灵敏度,特异性,精度和准确性。在商业包装厂水果上检测痕量XCC感染导致0.7313,0.9947,0.8750和0.9821在一系列纸箱中,相同的纸箱,虽然有0-10%的XCC感染的果实,但仍然存在嘈杂,热和潜在分散的环境。在果园中,犬氨酸的敏感性随着病变的发病率而增加,而特异性和总体准确性在所有入射水平上有0.99;即,假阳性率均匀低。犬帽还提醒一系列具有同等准确性的1-12周龄感染。当训练为XCC感染的树木或XCC腋生培训时,犬本身检测到同源和异源靶标,表明它们可以直接检测XCC,而不是仅在感染后宿主产生的挥发物。犬物能够以非常低的浓度检测XCC气味签名(每个样品10,000×小细胞细胞),这意味着香味签名由细菌细胞挥发性有机化合物成分或渗出物组成,其在浓度下发生许多折叠的渗出物细菌细胞。结果意味着犬类可以被培训为XCC的可行早期探测器,并在柑橘果园,包装屋和苗圃中部署。

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