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Synthetic and bioactivity studies of antiplasmodial and antibacterial marine natural products

机译:抗疟原虫和抗菌海洋天然产物的合成和生物活性研究

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摘要

This thesis is divided into two parts, assessing marine and synthetic compounds active firstly against Plasmodium falciparum (Chapter 3 and 4) and secondly active against methicillin resistant Staphylococcus aureus (MRSA, Chapter 5). In Chapter 3 the synthesis of nine new tricyclic podocarpanes (3.203-3.207 and 3.209-3.212) from the diterpene (+)-manool is described. Initial SAR study of synthetic podocarpanes concluded that the most active compound was a C-13 phenyl substituted podocarpane (3.204, IC₅₀ 6.6 μM). By preparing analogues with varying halogenated substituents on the phenyl ring (3.209-3.212) the antiplasmodial activity was improved (IC₅₀ 1.4 μM), while simultaneously decreasing the haemolysis previously reported for this class of compounds. Inspired by the antiplasmodial activity of Wright and Wattanapiromsakul’s tricycle marine isonitriles (2.16-2.21 and 2.24-2.27) an unsuccessfully attempt was made to convert tertiary alcohol moieties to isonitrile functionalities in compounds 3.188, 3.204-3.207 and 3.209-3.212.Over a decade ago Wright et al. proposed a putative antiplasmodial mechanism of action for marine isonitriles (2.4, 2.9, 2.15, 2.19 and 2.35) and isothiocyanate (2.34) which involved interference in haem detoxification by P. falciparum thus inhibiting the growth of the parasite. In Chapter 4 we describe how we successfully managed to scale down Egan’s β-haematin inhibition assay for the analyses of small quantities of marine natural products as potential β-haematin inhibitors. Our modified assay revealed that the most active antiplasmodial marine isonitrile 2.9 (IC₅₀ 13 nM) showed total β-haematin inhibition while 2.15 (IC₅₀ 81 nM) and 2.19 (IC₅₀ 31 nM) showed partial inhibition at three equivalents relative to haem. Using contempary molecular modelling techniques the charge on the isonitrile functionality was more accurately describe and the modified charge data sets was used to explore docking of marine isonitriles to haem using AutoDock.In Chapter 5 we describe how a lead South African marine bisindole MRSA pyruvate kinase inhibitor (5.8) was discovered in collaboration with colleagues at the University of British Columbia (UBC) and how this discovery inspired us to design a synthetic route to the dibrominated bisindole, isobromotopsentin (5.20) in an attempt to increase the bioactivity displayed by 5.8. We devised a fast and high yielding synthetic route using microwave assited organic synthesis. We first tested this synthesis using simple aryl glyoxals (5.27-5.32) as precursors to synthesize biphenylimidazoles (5.21-5.26), which later allowed us to synthesize the ascidian natural product 5.111. This method was sucessfully extended to the synthesis of deoxytopsentin (5.33) from an N-Boc protected indole methyl ketone (5.89). We subsequently were able to effectively remove the carbamate protection via thermal decomposition by heating the protected bisindole imidazole (5.90) in a microwave reactor for 5 min under argon. The synthesis of 5.20 resulted in an inseparable mixture of monoprotected and totally deprotected topsentin products, and due to time constraints we were not able to optimise this synthesis. Nonetheless our synthesis of the marine natural product 5.33 which was faster and higher yielding than previously reported routes could be extended to the synthesis of other topsentin bisindoles (5.138-5.140). Work towards this goal continues in our laboratory.
机译:本论文分为两个部分,首先评估对恶性疟原虫有活性的海洋和合成化合物(第3章和第4章),其次对抗甲氧西林金黄色葡萄球菌有活性(MRSA,第5章)。在第3章中,描述了由二萜(+)-manool合成9个新的三环罗丹烷(3.203-3.207和3.209-3.212)。合成罗汉松的SAR初步研究得出的结论是,活性最高的化合物是C-13苯基取代的罗汉松(3.204,IC₅₀6.6μM)。通过制备在苯环(3.209-3.212)上具有不同卤代取代基的类似物,可以提高抗血浆活性(IC 50 1.4μM),同时减少先前报道的这类化合物的溶血作用。受赖特(Wright)和Wattanapiromsakul的三轮船海洋异腈(2.16-2.21和2.24-2.27)的抗疟原虫活性的启发,尝试将化合物3.188、3.204-3.207和3.209-3.212中的叔醇部分转化为异腈功能没有成功。赖特等。提出了一种推定的抗海洋异腈(2.4、2.9、2.15、2.19和2.35)和异硫氰酸酯(2.34)的抗血浆作用机理,其中涉及恶性疟原虫对血红素的解毒作用,从而抑制了寄生虫的生长。在第4章中,我们描述了如何成功地按比例缩小Egan的β-haematin抑制分析,以分析少量潜在的β-haematin抑制剂的海洋天然产物。我们改良的检测方法显示,活性最高的抗疟原虫海洋异腈2.9(IC₅₀13 nM)表现出对β-血红素的总抑制作用,而2.15(IC₅₀81 nM)和2.19(IC₅₀31 nM)表现出相对于血红素三倍当量的部分抑制作用。使用当代分子建模技术,可以更准确地描述有关异腈功能的电荷,并使用改良的电荷数据集探索使用AutoDock进行海洋异氰酸对接的过程。在第5章中,我们介绍了南非海洋双吲哚MRSA丙酮酸铅激酶抑制剂的主要作用。 (5.8)是与不列颠哥伦比亚大学(UBC)的同事合作发现的,这一发现如何激发我们设计合成二溴化双吲哚,异溴青霉素(5.20)的合成路线,以试图提高5.8的生物活性。我们设计了一种利用微波辅助有机合成的快速高产合成路线。我们首先使用简单的芳基乙二醛(5.27-5.32)作为合成联苯咪唑(5.21-5.26)的前体来测试该合成,随后使我们能够合成海鞘天然产物5.111。该方法成功地扩展到由N-Boc保护的吲哚甲基酮(5.89)合成脱氧托普汀(5.33)。随后,我们可以通过在氩气下在微波反应器中加热受保护的双吲哚咪唑(5.90),通过热分解来有效去除氨基甲酸酯保护。 5.20的合成导致了单保护和完全脱保护的托普汀产品的不可分割的混合物,并且由于时间限制,我们无法优化该合成。尽管如此,我们合成的海洋天然产物5.33比以前报道的途径更快,产量更高,可以扩展到其他托普森汀双吲哚(5.138-5.140)的合成。为了达到这个目标,我们的实验室正在继续努力。

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    Young Ryan Mark;

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  • 年度 2011
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  • 正文语种 {"code":"en","name":"English","id":9}
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