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Shotgun proteomics to unravel the complexity of the Leishmania infantum exoproteome and the relative abundance of its constituents

机译:弹枪蛋白质组学可阐明婴儿利什曼原虫外切蛋白质组的复杂性及其组成部分的相对丰度

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The exoproteome of some Leishmania species has revealed important insights into host-parasite interaction, paving the way for the proposal of novel disease-oriented interventions. The focus of the present investigation constituted the molecular profile of the L. infantum exoproteome revealed by a shotgun proteomic approach. Promastigotes under logarithmic phase of growth were obtained and harvested by centrifugation at different time points. Cell integrity was evaluated through the counting of viable parasites using propidium iodide labeling, followed by flow cytometry analysis. The 6 h culture supernatant, operationally defined here as exoproteome, was then conditioned to in solution digestion and the resulting peptides submitted to mass spectrometry. A total of 102 proteins were identified and categorized according to their cellular function. Their relative abundance index (emPAI) allowed inference that the L. infantum exoproteome is a complex mixture dominated by molecules particularly involved in nucleotide metabolism and antioxidant activity. Bioinformatic analyses support that approximately 60% of the identified proteins are secreted, of which, 85% possibly reach the extracellular milieu by means of non-classic pathways. At last, sera from naturally infected animals, carriers of differing clinical forms of Canine Visceral Leishmaniasis (CVL), were used to test the immunogenicity associated to the L. infantum exoproteome. Western blotting experiments revealed that this sub-proteome was useful at discriminating symptomatic animals from those exhibiting other clinical forms of the disease. Collectively, the molecular characterization of the L. infantum exoproteome and the preliminary immunoproteomic assays opened up new research avenues related to treatment, prognosis and diagnosis of CVL.
机译:一些利什曼​​原虫物种的蛋白质组学揭示了宿主与寄生虫相互作用的重要见解,为提出新的以疾病为导向的干预措施铺平了道路。本研究的重点是by弹枪蛋白质组学方法揭示的婴儿乳杆菌外蛋白质组的分子概况。获得处于对数生长期的前鞭毛体,并在不同时间点通过离心收获。通过使用碘化丙啶标记计数活寄生虫,然后进行流式细胞术分析来评估细胞完整性。然后将在操作上定义为外蛋白组的6 h培养上清液进行溶液消化,然后将所得肽段进行质谱分析。总共鉴定了102种蛋白质,并根据其细胞功能进行了分类。他们的相对丰度指数(emPAI)可以推断出婴儿乳杆菌外蛋白质组是一种复杂的混合物,主要由特别是参与核苷酸代谢和抗氧化活性的分子控制。生物信息学分析支持大约60%的已识别蛋白质被分泌,其中85%可能通过非经典途径到达细胞外环境。最后,使用来自自然感染动物的血清,该动物是犬内脏利什曼病(CVL)不同临床形式的携带者,用于测试与婴儿乳杆菌外蛋白质组相关的免疫原性。蛋白质印迹实验表明,该亚蛋白质组可用于将有症状动物与表现出该疾病其他临床形式的动物区分开。总的来说,婴儿乳杆菌外蛋白质组的分子表征和初步的免疫蛋白质组学测定方法开辟了与CVL的治疗,预后和诊断有关的新研究途径。

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