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首页> 外文期刊>Antiviral Research >Amino acid similarities and divergences in the small surface proteins of genotype C hepatitis B viruses between nucleos(t)ide analogue-naive and lamivudine-treated patients with chronic hepatitis B
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Amino acid similarities and divergences in the small surface proteins of genotype C hepatitis B viruses between nucleos(t)ide analogue-naive and lamivudine-treated patients with chronic hepatitis B

机译:慢性乙型肝炎的核苷酸类似物初治和拉米夫定治疗的基因型C型乙型肝炎病毒小表面蛋白的氨基酸相似性和差异

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Entire C-genotype small hepatitis B surface (SHBs) sequences were isolated from 139 nucleos(t)ide analogues (NA)-nai've and 74 lamivudine (LMV)-treated chronic hepatitis B (CHB) patients. The conservation and variability of total 226 amino acids (AAs) within the sequences were determined individually, revealing significant higher mutant isolate rate and mutation frequency in LMV-treated cohort than those in the NA-naive one (P = 0.009 and 0.0001, respectively). Three absolutely conserved fragments (sl6-sl9, s176-sl81 and sl85-sl88) and seven moderately conserved regions (a few AA sites acquiring increased variability after LMV-treatment) were identified. The significant mutation rate increase after LMV-treatment occurred primarily in major hydrophilic region (except 'a' determinant) and transmembrane domain 3/4, but not in other upstream functional regions of SHBs. With little influence on immune escape-associated mutation frequencies within 'a' determinant, LMV-monotherapy significantly induced classical LMVr-associated mirror changes sE164D/rtV173L, sI195M/rtM204V and sW196L/S/rtM204I, as well as non-classical ones sG44E/rtS53N, sT47K/A/rtH55R/(i and sW182stop/rtV191I outside 'a' determinant. Interestingly, another newly-identified truncation mutation sC69stop/rtS78T decreased from 7.91% (11/139) in NA-naive cohort to 2.70% (2/74) in LMV-treated one. Altogether, the altered AA conservation and diversity in SHBs sequences after LMV-treatment in genotype-C HBV infection might shed new insights into how LMV-therapy affects the SHBs variant evolution and its antigenicity.
机译:完整的C基因型乙型肝炎小表面(SHBs)序列是从139个核苷酸(t)核苷酸类似物(NA)-纯和74例拉米夫定(LMV)治疗的慢性乙型肝炎(CHB)患者中分离出来的。分别确定了序列中总共226个氨基酸(AA)的保守性和变异性,表明LMV治疗组的突变分离率和突变频率显着高于NA幼稚组(分别为P = 0.009和0.0001) 。鉴定出三个绝对保守的片段(sl6-sl9,s176-sl81和sl85-sl88)和七个中等保守的区域(在LMV处理后有几个AA位点获得增加的变异性)。 LMV处理后,显着的突变率增加主要发生在主要亲水区域(“ a”决定簇除外)和跨膜结构域3/4,但没有发生在SHB的其他上游功能区域。在'a'决定因素内对免疫逃逸相关突变频率的影响很小,LMV单一疗法可显着诱导经典LMVr相关镜面变化sE164D / rtV173L,sI195M / rtM204V和sW196L / S / rtM204I,以及非经典sG44E / rtS53N,sT47K / A / rtH55R /(i和sW182stop / rtV191I在'a'行列式之外。有趣的是,另一个新鉴定的截短突变sC69stop / rtS78T从NA天真的队列中的7.91%(11/139)降低到2.70%(2 / 74)在LMV治疗组中,总的说来,基因型C HBV感染LMV治疗后,SHBs序列的AA保守性和多样性发生了改变,这可能为LMV治疗如何影响SHBs变异及其抗原性提供了新的见识。

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