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Comparative Genomics Reveals Shared Mutational Landscape in Canine Hemangiosarcoma and Human Angiosarcoma

机译:比较基因组学揭示了犬血管瘤和人类昂贵群岛的共同突变景观

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摘要

Angiosarcoma is a highly aggressive cancer of blood vessel-forming cells with few effective treatment options and high patient mortality. It is both rare and heterogenous, making large, well-powered genomic studies nearly impossible. Dogs commonly suffer from a similar cancer, called hemangiosarcoma, with breeds like the golden retriever carrying heritable genetic factors that put them at high risk. If the clinical similarity of canine hemangiosarcoma and human angiosarcoma reflects shared genomic etiology, dogs could be a critically needed model for advancing angiosarcoma research. We assessed the genomic landscape of canine hemangiosarcoma via whole-exome sequencing (47 golden retriever hemangiosarcomas) and RNA sequencing (74 hemangiosarcomas from multiple breeds). Somatic coding mutations occurred most frequently in the tumor suppressor TP53 (59.6% of cases) as well as two genes in the PI3K pathway: the oncogene PIK3CA (29.8%) and its regulatory subunit PIK3R1 (8.5%). The predominant mutational signature was the age-associated deamination of cytosine to thymine. As reported in human angiosarcoma, CDKN2A/B was recurrently deleted and VEGFA, KDR, and KIT recurrently gained. We compared the canine data to human data recently released by The Angiosarcoma Project, and found many of the same genes and pathways significantly enriched for somatic mutations, particularly in breast and visceral angiosarcomas. Canine hemangiosarcoma closely models the genomic landscape of human angiosarcoma of the breast and viscera, and is a powerful tool for investigating the pathogenesis of this devastating disease.
机译:Agiosarcoma是一种高度激进的血管形成细胞癌,有效的治疗方案少,患者死亡率高。它既难得和异因,制造大,动力良好的基因组研究几乎不可能。狗通常患有类似的癌症,称为升血管瘤,以及像金毛猎犬一样携手遗传的遗传因素,让它们处于高风险。如果犬血管瘤和人类昂贵的临床相似性反映了共同的基因组病因,则狗可能是推进Agiosarcoma研究的重点所需的模型。我们通过全面测序(47个金毛臂升降机)和RNA测序(来自多种品种的74个血管糖)来评估犬致血管瘤的基因组景观。在肿瘤抑制器TP53(案例的59.6%)以及PI3K途径中的两个基因中,体细胞编码突变最常发生:癌基因PIK3CA(29.8%)及其调节亚基PIK3R1(8.5%)。主要的突变签名是胞嘧啶的年龄相关的胸腺嘧啶。如人的疼痛,CDKN2A / B在人体上癌症中均经常删除和VEGFA,KDR和试剂盒经常获得。我们将犬类数据与Agiosarcoma项目最近释放的人类数据进行比较,发现许多相同的基因和途径显着富集,特别是在乳腺和内脏癌症中。犬升血管瘤密切模特模型乳腺和内脏人类ariosarcoma的基因组景观,是调查这种破坏性疾病发病机制的强大工具。

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  • 来源
    《Molecular cancer research: MCR》 |2019年第12期|共12页
  • 作者单位

    Broad Inst Harvard &

    MIT 415 Main St 75A-6108B Cambridge MA 02142 USA;

    Broad Inst Harvard &

    MIT 415 Main St 75A-6108B Cambridge MA 02142 USA;

    Broad Inst Harvard &

    MIT 415 Main St 75A-6108B Cambridge MA 02142 USA;

    Univ Minnesota Coll Vet Med Dept Vet Clin Sci St Paul MN 55108 USA;

    Univ Minnesota Anim Canc Care &

    Res Program St Paul MN 55108 USA;

    Uppsala Univ Dept Med Biochem &

    Microbiol Sci Life Lab Uppsala Sweden;

    Broad Inst Harvard &

    MIT 415 Main St 75A-6108B Cambridge MA 02142 USA;

    Broad Inst Harvard &

    MIT 415 Main St 75A-6108B Cambridge MA 02142 USA;

    Broad Inst Harvard &

    MIT 415 Main St 75A-6108B Cambridge MA 02142 USA;

    Univ Minnesota Coll Vet Med Dept Vet Clin Sci St Paul MN 55108 USA;

    Univ Minnesota Coll Vet Med Dept Vet Clin Sci St Paul MN 55108 USA;

    Univ Minnesota Coll Vet Med Dept Vet Clin Sci St Paul MN 55108 USA;

    North Carolina State Coll Vet Med Dept Clin Sci Raleigh NC USA;

    Broad Inst Harvard &

    MIT 415 Main St 75A-6108B Cambridge MA 02142 USA;

    Broad Inst Harvard &

    MIT 415 Main St 75A-6108B Cambridge MA 02142 USA;

    Broad Inst Harvard &

    MIT 415 Main St 75A-6108B Cambridge MA 02142 USA;

    North Carolina State Univ Coll Vet Med Dept Mol Biomed Sci Raleigh NC USA;

    Broad Inst Harvard &

    MIT 415 Main St 75A-6108B Cambridge MA 02142 USA;

    North Carolina State Univ Coll Vet Med Dept Mol Biomed Sci Raleigh NC USA;

    Univ Minnesota Coll Vet Med Dept Vet Clin Sci St Paul MN 55108 USA;

    Broad Inst Harvard &

    MIT 415 Main St 75A-6108B Cambridge MA 02142 USA;

    Broad Inst Harvard &

    MIT 415 Main St 75A-6108B Cambridge MA 02142 USA;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 肿瘤学;
  • 关键词

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