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Molecular Characteristics of Erythromycin-Resistant Streptococcus pyogenes Strains Isolated from Children Patients in Tunis, Tunisia

机译:突尼斯突尼斯儿童患者分离的红霉素抗性链球菌的分子特征

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Aim: The aims of our study were to characterize phenotypically and genotypically erythromycin-resistant Streptococcus pyogenes or group A streptococci (ERGAS) isolates, to evaluate macrolide resistance and to analyze the association between emm types and virulence factors. Included in this study were all ERGAS strains isolated from 2000 to 2013 at the Children's hospital of Tunis. Antimicrobial susceptibility was performed according to the CA-SFM guidelines. Macrolide resistance genes were revealed by polymerase chain reaction (PCR) method. Virulence factor genes (pyrogenic exotoxin genes and superantigen gene) were detected by PCR, and the emm types were defined by the sequencing of the variable 5 end of the emm gene. Results: Among the 289 GAS isolates collected, 15 (5.2%) were resistant to erythromycin; 7 of the strains were assigned to the cMLS(B) phenotype (46.6%); 5 harbored ermB gene alone (33.3%); and 2 strains coharbored ermB and mefA (13.3%). The remaining (53.4%) were assigned to the M phenotype and harbored the mefA gene. The frequency of detection of each toxin gene among ERGAS was 13.4% for speA (2 strains), 53.4% for speC (8 strains), and 13.4% for ssa (2 strains). Emm types 1, 58, 11, and 78 were the most frequent among ERGAS strains. The distribution of the cMLS(B) and M phenotypes changed over the period of investigation with a decrement of cMLS(B) phenotype and ermB gene that predominated between 2000 and 2006 and an increase of M phenotype and mefA gene between 2007 and 2013, but this difference was nonstatistically significant because of the low number of resistant strains. Emm types 1, 58, and 4 were only present among strains assigned to the M phenotype. However strains assigned to the cMLS(B) phenotype were associated to emm11, emm22, emm28, emm78, or emm76. There was diversity in emm distribution in ERGAS between the two study periods. There was diversity in emm distribution among ERGAS particularly in 2000-2006. Indeed, from 2000 to 2006, the 6 ERGAS belonged to 5 different emm types (22, 28, 76, 11, and 4), while between 2007 and 2013, seven among the nine ERGAS belonged to only 2 emm types 58 and 1. The speA gene was present only among emm1 isolates, and the ssa gene was associated with emm4 and emm78 types. All emm78, emm28, and emm11 strains harbored speC gene. Conclusions: Our study revealed a low frequency of ERGAS and few emm types were associated with these strains.
机译:目的:我们的研究的目的是表征表型和基因型红霉素抗性链球菌或基因霉菌(ERGAS)分离株,以评估大氯化物抗性并分析EMM类型和毒力因子之间的关联。本研究包括在突尼斯儿童医院的2000年至2013年被孤立的所有Ergas菌株。根据CA-SFM指南进行抗微生物易感性。通过聚合酶链反应(PCR)方法揭示了大环内酯抗性基因。通过PCR检测毒力因子基因(热原子毒素基因和超抗原基因),通过EMM基因的可变5末端测序来定义EMM类型。结果:收集的289个天然气分离物中,15(5.2%)对红霉素耐药;将7株分配给CMLS(B)表型(46.6%); 5单独的5个哈博尔的ERMB基因(33.3%); 2株COHARBORED ERMB和MEFA(13.3%)。将剩余的(53.4%)分配给M表型并覆盖MEFA基因。对于SPEA(2株)的ERGAs中,每个毒素基因的检测频率为13.4%,对于SSA(2株),SSA(8株)的53.4%,13.4%。 EMM类型1,58,11和78是ERGAS菌株中最常见的。 CMLS(B)和M表型的分布在调查期间改变了CMLS(B)表型和ERMB基因的调查期间,以2000年至2006年占优势,2007年至2013年之间的M表型和MEFA基因增加,但是由于抗性菌株较数较多,这种差异是非间隙的。 EMM类型1,58和4只存在于分配给M表型的菌株之间。然而,分配给CMLS(B)表型的菌株与EMM11,EMM22,EMM28,EMM78或EMM76相关。两项研究期间ERGAS中的EMM分布有多样性。 ERGAS在2000 - 2006年的ERGAS中有多样性。实际上,从2000年到2006年,6个ERGA属于5种不同的EMM类型(22,28,76,11和4),而2007年至2013年间,九次ergas中的七种属于2个EMM类型58和1。 SPEA基因仅在EMM1分离物中存在,并且SSA基因与EMM4和EMM78类型相关。所有EMM78,EMM28和EMM11菌株都患有斑点规格基因。结论:我们的研究显示出低频的ERGAS,很少有EMM类型与这些菌株有关。

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