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Comparison of Eight Phenotypic Methods for Subspecies Characterization of Thermophilic Campylobacter spp. Isolated from Pig Liver

机译:嗜热弯曲杆菌属亚种鉴定的八种表型方法的比较。分离自猪肝

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Four hundred pork livers from bacon pigs (37 herds) obtained at six pig-processing plants were studied to assess the Campylobacter contamination rate. Deep tissue areas were sampled immediately after evisceration. Approximately 6% of livers were infected with Campylobacter spp., including Campylobacter coli (67%), Campylobacter jejuni (30%), and Campylobacter lari (3%). The 60 resulting isolates (39 C. coli isolates, 19 C. jejuni isolates, and 2 C. tori isolates) employed in this study were characterized at the subspecies level in a comparison of eight phenotyping schemes, including four biotyping, two serotyping, and two phage-typing schemes. The Skirrow-Benjamin biotyping scheme produced two biotypes for C. jejuni, i.e., biotype 2 (95%) and biotype 1 (5%). The Lior biotyping scheme subdivided C. coli into biotype 1 (41%) and biotype 2 (59%), while biotype 4 was the dominant type (95%) for C. jejuni. The Roop scheme allowed further differentiation of C. coli into three biovars, i.e., biovar 1 (57%), biovar 2 (40%), and biovar 3 (3%), and it subdivided C. jejuni into two biotypes, i.e., biovar 1 (95%) and biovar 2 (5%). Preston biotyping produced the largest degree of subspecies differentiation, with 18 C. coli biotypes and 7 C. jejuni biotypes being identified. The most common were biotypes 2650 and 6030, representing 18 and 42% of all C. coli and C. jejuni isolates, respectively. The Penner-Hennessy serotyping scheme successfully serotyped 89% of the isolates, with 10 serotypes being identified; 30% of the serotypeable isolates were accounted for by Penner 23, followed by Penner 20 (16%) and Penner 39 (14%). The Lior serotyping scheme successfully serotyped only 45% of the strains, and eight serogroups were identified, with Lior 36 (31%), Lior 20 (23%), and Lior 5 being the most frequent. The Preston scheme and the Khakhria-Lior phage-typing scheme were able to type 16 and 25% of the isolates, respectively. The Preston scheme produced three phage groups, i.e., 69 (56%), 90 (22%), and 116 (22%), and the Khakhria-Lior scheme also produced three phage types, i.e., 44 (40%), 27 (33%), and 37 (20%), as well as atypical lysis patterns (7%). The results of this study demonstrate the role of Preston biotyping in the phenotyping of isolates, particularly in diagnostic laboratories that have no access or limited access to molecular typing equipment.
机译:研究了从六家猪加工厂获得的培根猪(37头猪)中的四百个猪肝,以评估弯曲杆菌的污染率。清除内脏后立即取样深层组织区域。大约6%的肝脏感染了弯曲杆菌属,包括大肠杆菌弯曲杆菌(67%),空肠弯曲菌(30%)和拉里弯曲杆菌(3%)。在八种表型设计方案的比较中,在亚种水平上对本研究中使用的60种分离株(39株大肠杆菌,空肠弯曲杆菌和2株花椰菜分离株)进行了表征,其中包括四种生物分型,两种血清分型和两种噬菌体分型方案。 Skirrow-Benjamin生物分型方案产生了空肠弯曲菌的两种生物型,即生物型2(95%)和生物型1(5%)。 Lior生物分型方案将大肠杆菌分为生物型1(41%)和生物型2(59%),而生物型4是空肠弯曲菌的主要类型(95%)。 Roop方案允许将大肠杆菌进一步分为三种生物变种,即生物变种1(57%),生物变种2(40%)和生物变种3(3%),并将空肠弯曲杆菌细分为两种生物型,即biovar 1(95%)和biovar 2(5%)。普雷斯顿生物分型产生了最大程度的亚种分化,已鉴定出18种大肠杆状杆菌生物型和7种空肠弯曲菌生物型。最常见的是2650和6030型生物型,分别代表所有大肠杆菌和空肠弯曲菌分离株的18%和42%。 Penner-Hennessy血清分型方案成功分离出89%的分离株,并鉴定出10种血清型。 Penner 23占血清型分离株的30%,其次是Penner 20(16%)和Penner 39(14%)。 Lior血清分型方案仅成功对45%的菌株进行了血清分型,并鉴定出8个血清群,其中Lior 36(31%),Lior 20(23%)和Lior 5是最常见的。 Preston方案和Khakhria-Lior噬菌体分型方案分别能够分离出16%和25%的分离株。 Preston方案产生了三个噬菌体组,即69个(56%),90个(22%)和116个(22%),而Khakhria-Lior方案也产生了三种噬菌体类型,即44个(40%),27个(33%)和37(20%),以及非典型的裂解模式(7%)。这项研究的结果证明了普雷斯顿生物分型在分离株表型中的作用,特别是在无法使用分子分型设备或无法使用分子分型设备的诊断实验室中。

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