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Intelligent image-based colourimetric tests using machine learning framework for lateral flow assays

机译:使用机器学习框架进行侧向流动分析的基于图像的智能比色测试

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This paper aims to deliberately examine the scope of an intelligent colourimetric test that fulfils ASSURED criteria (Affordable, Sensitive, Specific, User-friendly, Rapid and robust, Equipment-free, and Deliverable) and demonstrate the claim as well. This paper presents an investigation into an intelligent image-based system to perform automatic paper-based colourimetric tests in real-time to provide a proof-of-concept for a dry-chemical based or microfluidic, stable and semi-quantitative assay using a larger dataset with diverse conditions. The universal pH indicator papers were utilised as a case study. Unlike the works done in the literature, this work performs multiclass colourimetric tests using histogram-based image processing and machine learning algorithm without any user intervention. The proposed image processing framework is based on colour channel separation, global thresholding, morphological operation and object detection. We have also deployed aserver-based convolutional neural network framework for image classification using inductive transfer learning on a mobile platform. The results obtained by both traditional machine learning and pre-trained model-based deep learning were critically analysed with the set evaluation criteria (ASSURED criteria). The features were optimised using univariate analysis and exploratory data analysis to improve the performance. The image processing algorithm showed >98% accuracy while the classification accuracy by Least Squares Support Vector Machine (LS-SVM) was 100%. On the other hand, the deep learning technique provided >86% accuracy, which could be further improved with a large amount of data. The k-fold cross-validated LS-SVM based final system, examined on different datasets, confirmed the robustness and reliability of the presented approach, which was further validated using statistical analysis. The understaffed and resource-limited healthcare system can benefit from such an easy-to-use technology to support remote aid workers, assist in elderly care and promote personalised healthcare by eliminating the subjectivity of interpretation. (C) 2019 Elsevier Ltd. All rights reserved.
机译:本文旨在仔细研究符合ASSURED标准(价格适中,敏感,特定,用户友好,快速且健壮,无需设备且可交付使用)的智能比色测试的范围,并证明其主张。本文介绍了一种基于智能图像的系统的研究,该系统可以实时执行基于纸张的自动比色测试,从而为基于化学干法或微流体,稳定和半定量分析的概念验证(使用更大的方法)具有不同条件的数据集。通用pH指示纸被用作案例研究。与文献中的工作不同,这项工作使用基于直方图的图像处理和机器学习算法执行多类比色测试,而无需任何用户干预。所提出的图像处理框架基于颜色通道分离,全局阈值处理,形态学运算和对象检测。我们还部署了基于服务器的卷积神经网络框架,用于在移动平台上使用归纳转移学习进行图像分类。传统的机器学习和基于模型的预训练深度学习所获得的结果都使用设定的评估标准(确定的标准)进行了严格分析。使用单变量分析和探索性数据分析对功能进行了优化,以提高性能。图像处理算法显示> 98%的精度,而最小二乘支持向量机(LS-SVM)的分类精度为100%。另一方面,深度学习技术提供了> 86%的准确度,如果有大量数据,则可以进一步改善。在不同数据集上检查的基于k倍交叉验证的LS-SVM最终系统,证实了所提出方法的鲁棒性和可靠性,并使用统计分析对其进行了进一步验证。人手不足且资源有限的医疗保健系统可以受益于这种易于使用的技术,通过消除解释的主观性来支持远程援助人员,协助老年人护理并促进个性化医疗保健。 (C)2019 Elsevier Ltd.保留所有权利。

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