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首页> 外文期刊>Journal of computational biology >Convolutional Neural Network for Histopathological Analysis of Osteosarcoma
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Convolutional Neural Network for Histopathological Analysis of Osteosarcoma

机译:卷积神经网络用于骨肉瘤组织病理学分析

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Pathologists often deal with high complexity and sometimes disagreement over osteosarcoma tumor classification due to cellular heterogeneity in the dataset. Segmentation and classification of histology tissue in H&E stained tumor image datasets is a challenging task because of intra-class variations, inter-class similarity, crowded context, and noisy data. In recent years, deep learning approaches have led to encouraging results in breast cancer and prostate cancer analysis. In this article, we propose convolutional neural network (CNN) as a tool to improve efficiency and accuracy of osteosarcoma tumor classification into tumor classes (viable tumor, necrosis) versus nontumor. The proposed CNN architecture contains eight learned layers: three sets of stacked two convolutional layers interspersed with max pooling layers for feature extraction and two fully connected layers with data augmentation strategies to boost performance. The use of a neural network results in higher accuracy of average 92% for the classification. We compare the proposed architecture with three existing and proven CNN architectures for image classification: AlexNet, LeNet, and VGGNet. We also provide a pipeline to calculate percentage necrosis in a given whole slide image. We conclude that the use of neural networks can assure both high accuracy and efficiency in osteosarcoma classification.
机译:由于数据集中的细胞异质性,病理学家经常处理高复杂性,有时在骨肉瘤肿瘤分类上存在分歧。 H&E染色的肿瘤图像数据集中的组织学组织的分割和分类是一项具有挑战性的任务,因为类内变异,类间相似性,拥挤的背景和嘈杂的数据。近年来,深度学习方法已在乳腺癌和前列腺癌分析中取得令人鼓舞的结果。在本文中,我们提出卷积神经网络(CNN)作为一种工具,以提高将骨肉瘤肿瘤分类为非肿瘤(活体肿瘤,坏死)的效率和准确性。拟议的CNN体​​系结构包含八个学习层:三层堆叠的两个卷积层,散布着用于特征提取的最大池化层,以及两个完全连接的层,其数据增强策略可提高性能。使用神经网络可以使分类的平均准确率更高,达到92%。我们将提议的体系结构与三种现有的经过验证的CNN体​​系结构进行图像分类:AlexNet,LeNet和VGGNet。我们还提供了一个管道来计算给定整个幻灯片图像中的坏死百分比。我们得出的结论是,神经网络的使用可以确保骨肉瘤分类的高准确性和高效率。

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