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首页> 外文期刊>Journal of computational biology: A journal of computational molecular cell biology >Convolutional Neural Network for Histopathological Analysis of Osteosarcoma
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Convolutional Neural Network for Histopathological Analysis of Osteosarcoma

机译:卷积神经网络骨肉瘤组织病理学分析

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摘要

Pathologists often deal with high complexity and sometimes disagreement over osteosarcoma tumor classification due to cellular heterogeneity in the dataset. Segmentation and classification of histology tissue in H&E stained tumor image datasets is a challenging task because of intra-class variations, inter-class similarity, crowded context, and noisy data. In recent years, deep learning approaches have led to encouraging results in breast cancer and prostate cancer analysis. In this article, we propose convolutional neural network (CNN) as a tool to improve efficiency and accuracy of osteosarcoma tumor classification into tumor classes (viable tumor, necrosis) versus nontumor. The proposed CNN architecture contains eight learned layers: three sets of stacked two convolutional layers interspersed with max pooling layers for feature extraction and two fully connected layers with data augmentation strategies to boost performance. The use of a neural network results in higher accuracy of average 92% for the classification. We compare the proposed architecture with three existing and proven CNN architectures for image classification: AlexNet, LeNet, and VGGNet. We also provide a pipeline to calculate percentage necrosis in a given whole slide image. We conclude that the use of neural networks can assure both high accuracy and efficiency in osteosarcoma classification.
机译:病理学家经常处理高复杂性,有时会因数据集细胞异质性而对骨肉瘤肿瘤分类进行高度分歧。 H&E染色肿瘤图像数据集中组织组织的分割和分类是一个具有挑战性的任务,因为类内变化,阶级相似性,拥挤的上下文和嘈杂的数据。近年来,深入学习方法导致乳腺癌和前列腺癌分析的令人鼓舞的结果。在本文中,我们提出了卷积神经网络(CNN)作为提高骨肉瘤肿瘤分类效率和准确性进入肿瘤课程(活肿瘤,坏死)与非肿瘤类别的工具。所提出的CNN架构包含八个学习的图层:三组堆叠的两个卷积层与MAX池层相互作用,用于特征提取和两个完全连接的图层,具有促进性能的数据增强策略。使用神经网络的使用导致分类平均92%的准确度。我们将拟议的架构与三个现有和经过验证的CNN架构进行比较,用于图像分类:AlexNet,Lenet和Vggnet。我们还提供了一种管道来计算给定的整个幻灯片图像中的百分比坏死。我们得出结论,神经网络的使用可以确保骨肉瘤分类中的高精度和效率。

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