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Calpastatin (CAST) gene polymorphism in Kajli, Lohi and Thalli sheep breeds

机译:Kajli,Lohi和Thalli绵羊品种中的Calpastatin(CAST)基因多态性

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摘要

Calpastatin-encoding gene (CAST)?is located on the fifth chromosome of sheep?and it plays an important role?in the development of muscles and in meat tenderness. The present study was conducted to investigate a calpastatin (CAST) gene polymorphism in Pakistani Thalli, Lohi and Kajli sheep breed. Random blood samples were collected from 300 animals (100 samples from each Thalli, Lohi?and?Kajli breeds). Genomic DNA was extracted using phenol-chloroform extraction method. A 622 bp?CAST?gene segment (exon 1C/1D region) was amplified by?polymerase chain reaction (PCR)using ovine specific primers.?Restriction fragment length polymorphisms (RFLPs)?in the amplified fragments were studied using?Msp1 restriction enzyme.?Frequencies of MM, MN and NN genotypes were found to be 77, 20 and 3% in Lohi breed and 68, 26 and 6% in Kajli breed respectively. In Thalli sheep,?only the MM (80%) and MN (20%) genotypes were detected. Chi-Square test (p < 0.05) showed that all the three populations used in this study were in Hardy-Weinberg equilibrium. By comparing the results of this study with those of previous studies, it seems that the MM genotype is the dominant genotype and the M allele is the dominant allele in small ruminant breeds belonging to different geographical locations.
机译:钙蛋白酶抑素编码基因(CAST)位于绵羊的第五条染色体上,在肌肉发育和肉嫩度中起重要作用。进行本研究以调查巴基斯坦Thalli,Lohi和Kajli绵羊品种中的钙抑素(CAST)基因多态性。从300只动物中收集随机血液样本(每个Thalli,Lohi?和Kajli品种100个样本)。使用酚-氯仿提取方法提取基因组DNA。利用绵羊特异性引物通过聚合酶链反应(PCR)扩增了一个622 bp的CASTα基因片段(外显子1C / 1D区域)。使用Msp1限制酶研究了扩增片段中的限制性片段长度多态性(RFLP)。在Lohi品种中发现MM,MN和NN基因型的频率分别为77%,20%和3%,在Kajli品种中分别为68%,26%和6%。在塔利羊中,仅检测到MM(80%)和MN(20%)基因型。卡方检验(p <0.05)表明,本研究中使用的三个总体均处于Hardy-Weinberg平衡状态。通过将本研究的结果与以前的研究结果进行比较,似乎在属于不同地理位置的小型反刍动物品种中,MM基因型是优势基因型,M等位基因是优势基因型。

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