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Mouse Urinary Biomarkers Provide Signatures of Maturation, Diet, Stress Level, and Diurnal Rhythm

机译:小鼠尿液生物标志物提供成熟,饮食,压力水平和昼夜节律的特征

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摘要

Body fluids such as urine potentially contain a wealth of information pertaining to age, sex, social and reproductive status, physiologic state, and genotype of the donor. To explore whether urine could encode information regarding environment, physiology, and development, we compared the volatile compositions of mouse urine using solid-phase microextraction and gas chromatography–mass spectrometry (SPME-GC/MS). Specifically, we identified volatile organic compounds (VOCs) in individual urine samples taken from inbred C57BL/6J-H-2b mice under several experimental conditions—maturation state, diet, stress, and diurnal rhythms, designed to mimic natural variations. Approximately 1000 peaks (i.e., variables) were identified per comparison and of these many were identified as potential differential biomarkers. Consistent with previous findings, we found groups of compounds that vary significantly and consistently rather than a single unique compound to provide a robust signature. We identified over 49 new predictive compounds, in addition to identifying several published compounds, for maturation state, diet, stress, and time-of-day. We found a considerable degree of overlap in the chemicals identified as (potential) biomarkers for each comparison. Chemometric methods indicate that the strong group-related patterns in VOCs provide sufficient information to identify several parameters of natural variations in this strain of mice including their maturation state, stress level, and diet.
机译:体液(例如尿液)可能包含大量与年龄,性别,社会和生殖状况,生理状况以及供体基因型有关的信息。为了探索尿液是否可以编码有关环境,生理和发育的信息,我们使用固相微萃取和气相色谱-质谱法(SPME-GC / MS)比较了小鼠尿液的挥发性成分。具体来说,我们在成熟状态,饮食,压力和昼夜节律等几种实验条件下,从自交C57BL / 6J-H-2 b 小鼠采集的单个尿液样品中鉴定出挥发性有机化合物(VOC),模仿自然变化。每次比较大约鉴定出1000个峰(即变量),其中许多峰被鉴定为潜在的差异生物标志物。与以前的发现一致,我们发现化合物组的变化显着且一致,而不是单个独特的化合物来提供强大的特征。除了确定几种公开的化合物,我们还确定了49种以上的新预测化合物,这些化合物包括成熟状态,饮食,压力和一天中的时间。我们发现,在每次比较中,被识别为(潜在)生物标志物的化学物质存在相当程度的重叠。化学计量学方法表明,VOC中与组相关的强模式提供了足够的信息,以鉴定该小鼠品系中自然变异的几个参数,包括它们的成熟状态,压力水平和饮食。

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  • 来源
    《Chemical Senses》 |2010年第6期|p.459-471|共13页
  • 作者单位

    Department of Neuroscience, Center for Sensory Biology, Department of Molecular Biology & Genetics, School of Medicine, Johns Hopkins University, 855 North Wolfe Street, Rangos Building Room 440, Baltimore, MD 21205, USA;

    Centre for Chemometrics, School of Chemistry, University of Bristol, Cantocks Close, Bristol BS8 1TS, UK;

    The Charles Stark Draper Laboratory, Inc., 555 Technology Square, Cambridge, MA 02139-3563, USA;

    SRI International, 333 Ravenswood Avenue 306-18, Menlo Park, CA 94025, USA;

    Centre for Chemometrics, School of Chemistry, University of Bristol, Cantocks Close, Bristol BS8 1TS, UK;

    Bioinformatics Program, Boston University, Boston, MA 02215, USA;

    Department of Neuroscience, Center for Sensory Biology, Department of Molecular Biology & Genetics, School of Medicine, Johns Hopkins University, 855 North Wolfe Street, Rangos Building Room 440, Baltimore, MD 21205, USA;

    Centre for Chemometrics, School of Chemistry, University of Bristol, Cantocks Close, Bristol BS8 1TS, UK;

    Department of Neuroscience, Center for Sensory Biology, Department of Molecular Biology & Genetics, School of Medicine, Johns Hopkins University, 855 North Wolfe Street, Rangos Building Room 440, Baltimore, MD 21205, USA;

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