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Isolation and characterization of a N4-like lytic bacteriophage infecting Vibrio splendidus, a pathogen of fish and bivalves

机译:分离和鉴定感染鱼类和双壳类动物病原体Splendidus的N4样裂解噬菌体

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摘要

A novel virulent bacteriophage, vB_VspP_pVa5, infecting a strain of Vibrio splendidus was isolated from a sea-cage aquaculture farm in Greece, and characterized using microbiological methods and genomic analysis. Bacteriophage vB_VspP_pVa5 is a N4-like podovirus with an icosahedral head measuring 85 nm in length and a short non-contractile tail. The phage had a narrow host range infecting only the bacterial host, a latent period of 30 min and a burst size of 24 virions per infected bacterium. Its genome size was 78,145 bp and genomic analysis identified 107 densely-packed genes, 40 of which could be annotated. In addition to the very large virion encapsulated DNA-dependent RNA polymerase which is the signature of the N4-like genus, an interesting feature of the novel phage is the presence of a self-splicing group I intron in the thymidylate synthase gene. A tRNAStop interrupted by a ~2.5kb open reading frame–containing area was also identified. The absence of genes related to lysogeny along with the high efficacy observed during in vitro cell lysis trials, indicate that the vB_VspP_pVa5 is a potential candidate component in a bacteriophage cocktail suitable for the biological control of V. splendidus in aquaculture.
机译:从希腊的一个海水笼养养殖场中分离出一种新型感染力强的噬菌体vB_VspP_pVa5,该菌感染了锦绣弧菌,并使用微生物学方法和基因组分析对其进行了表征。噬菌体vB_VspP_pVa5是一种类似N4的足病毒,其二十面体头的长度为85 nm,尾巴短而没有收缩。噬菌体具有狭窄的宿主范围,仅感染细菌宿主,潜伏期为30分钟,每个感染细菌的爆发大小为24个病毒体。它的基因组大小为78,145 bp,基因组分析确定了107个紧密堆积的基因,其中40个可以注释。除了非常大的病毒体包裹的DNA依赖性RNA聚合酶(是N4样属的标志)外,新型噬菌体的一个有趣特征是胸苷酸合酶基因中存在自剪切的I组内含子。还确定了一个被〜2.5kb开放阅读框包含区域打断的tRNA Stop 。在体外细胞裂解试验中观察到的与溶源性相关的基因缺失以及高效性表明,vB_VspP_pVa5是噬菌体混合物中潜在的候选成分,适用于水产养殖中的锦绣葡萄菌的生物防治。

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