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Clinical significance of clonal hematopoiesis in the interpretation of blood liquid biopsy

机译:克隆血液血液中血液液体活检解释的临床意义

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摘要

As the use of next‐generation sequencing (NGS) for plasma cell‐free DNA (cfDNA) continues to expand in clinical settings, accurate identification of circulating tumor DNA mutations is important to validate its use in the clinical management for cancer patients. Here, we aimed to characterize mutations including clonal hematopoiesis (CH)‐related mutations in plasma cfDNA and tumor tissues using the same ultradeep NGS assay and evaluate the clinical significance of CH‐related mutations on the interpretation of liquid biopsy results. Ultradeep targeted NGS using Oncomine Pan‐Cancer Panel was performed on matched surgically resected tumor tissues, peripheral blood cells (PBCs), and 120 plasma cfDNA samples from 38 colorectal cancer patients. The clinical significance of the CH‐related mutations in plasma cfDNA was evaluated by longitudinal monitoring of the postoperative plasma samples. Among the 38 patients, 74 nonsynonymous mutations were identified from tumor tissues and 64 mutations from the preoperative plasma samples. Eleven (17%) of the 64 mutations identified in plasma cfDNA were also detected in PBC DNA and were identified to be CH‐related mutations. Overall, 11 of 38 (29%) patients in this cohort harbored at least one CH‐related mutation in plasma cfDNA. These CH‐related mutations were continuously detected in subsequent postoperative plasma samples from three patients which could be misinterpreted as the presence of residual disease or as lack of treatment response. Our results indicated that it is essential to integrate the mutational information of PBCs to differentiate tumor‐derived from CH‐related mutations in liquid biopsy analysis. This would prevent the misinterpretation of results to avoid misinformed clinical management for cancer patients.
机译:由于使用下一代测序(NGS)对血浆细胞的DNA(CFDNA)继续在临床环境中进行扩张,因此精确鉴定循环肿瘤DNA突变对于验证其在癌症患者的临床管理中的使用是重要的。在此,我们的目的是使用相同的UltraDeeN NGS测定来表征包括克隆血液(CH) - 肿瘤组织中的克隆血液血液(CH)相关突变的突变,并评估CH相关突变对液检结果解释的临床意义。 UltraDeep靶向NGS使用Oncomine Pan-Cancer Canors进行匹配的手术切除肿瘤组织,外周血细胞(PBC)和来自38名结肠直肠癌患者的120个血浆CFDNA样本。通过术后血浆样品的纵向监测评价血浆CFDNA中的CH相关突变的临床意义。在38例患者中,从术前等离子体样品中鉴定出74个非纯突变和64个突变。在PBC DNA中也检测到血浆CFDNA中鉴定的64个突变的11个(17%),并鉴定为CH相关突变。总体而言,这队队列中的11名中,共38名(29%)患者在血浆CFDNA中至少有一个CH相关突变。在来自三名患者的随后的术后血浆样品中连续检测这些CH相关突变,这是一种可能被误解为残留疾病的存在或缺乏治疗反应。我们的结果表明,必须整合PBC的突变信息,以区分液体活检分析中的CH相关突变的肿瘤衍生。这将阻止对结果的误解,以避免癌症患者的错误信息临床管理。

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