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Analysis of differential gene expression and alternative splicing is significantly influenced by choice of reference genome

机译：差异基因表达和选择性剪接的分析受参考基因组选择的影响很大

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期刊名称 RNA
作者
Erin Slabaugh; Jigar S. Desai; Ryan C. Sartor; Lovely Mae F. Lawas; S.V. Krishna Jagadish; Colleen J. Doherty;
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作者单位

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年(卷),期 2019(25),6
年度 2019
页码 -1
总页数 16
原文格式 PDF
正文语种
中图分类分子生物学;
关键词
differential gene expression; splicing; reference genome; RNA-seq; transcriptome analysis;

机译：差异基因表达剪接参考基因组RNA序列转录组分析;

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专利

1. Analysis of differential gene expression and alternative splicing is significantly influenced by choice of reference genome [J] . Slabaugh Erin, Desai Jigar S., Sartor Ryan C., RNA . 2019,第6期

机译：差分基因表达的分析和替代剪接的选择性受到参考基因组的选择性影响
2. General regulatory effects of hypoxia on human cartilage endplate-derived stem cells: A genome-wide analysis of differential gene expression and alternative splicing events [J] . Yao Yuan, Song Weilin, Deng Qiyue, Molecular medicine reports . 2017,第3aPta1期

机译：缺氧对人类软骨底板衍生干细胞的一般调节作用：差异基因表达的基因组分析及替代剪接事件
3. Whole genome exon arrays identify differential expression of alternatively spliced, cancer-related genes in lung cancer [J] . Xi L, Feber A, Gupta V, Nucleic Acids Research . 2008,第20期

机译：全基因组外显子阵列可鉴定肺癌中剪接的癌相关基因的差异表达
4. DASE: Condition-specific differential alternative splicing variants estimation method without reference genome sequence, and its application to non-model organisms [C] . Kouki Yonezawa, Tsukasa Mori, Shuichi Shigeno, IEEE International Conference on Bioinformatics and Biomedicine . 2016

机译：DASE：无参考基因组序列的条件特异性差异替代剪接变体估计方法，其在非模式生物中的应用
5. Genome-wide analysis of splicing related genes and alternative splicing in plants. [D] . Wang, Bing-Bing. 2005

机译：全基因组分析剪接相关基因和植物中的选择性剪接。
6. Whole genome exon arrays identify differential expression of alternatively spliced cancer-related genes in lung cancer [O] . Liqiang Xi, Andrew Feber, Vanita Gupta, 2008

机译：全基因组外显子阵列可鉴定肺癌中与剪接相关的癌相关基因的差异表达
7. Analysis of differential gene expression and alternative splicing is significantly influenced by choice of reference genome [O] . Erin Slabaugh, Jigar S. Desai, Ryan C. Sartor, 2019

机译：差分基因表达的分析和替代剪接的选择性受到参考基因组的选择性影响
8. Differential Control of ErBB2 Surface Expression in Breast Cancer Cells by an Alternatively Spliced Form of ERBIN [R] . Ching, K. H. 2005

机译：通过ERBIN的可变剪接形式对乳腺癌细胞中ErBB2表面表达的差异控制

Analysis of differential gene expression and alternative splicing is significantly influenced by choice of reference genome

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