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A Critical View of the Application of the APEX Software (Aqueous Photochemistry of Environmentally-Occurring Xenobiotics) to Predict Photoreaction Kinetics in Surface Freshwaters

机译:应用APEX软件(环境生源生物的水性光化学)预测淡水表面光反应动力学的批判性观点

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摘要

The APEX (aqueous photochemistry of environmentally occurring xenobiotics) software computes the phototransformation kinetics of compounds that occur in sunlit surface waters. It is free software based on Octave, and was originally released in 2014. Since then, APEX has proven to be a remarkably flexible platform, allowing for the addressing of several environmental problems. However, considering APEX as a stand-alone software is not conducive to exploiting its full potentialities. Rather, it is part of a whole ecosystem that encompasses both the software and the laboratory protocols that allow for the measurement of substrate photoreactivity parameters. Coherently with this viewpoint, the present paper shows both how to use APEX, and how to experimentally derive or approximately assess the needed input data. Attention is also given to some issues that might provide obstacles to users, including the extension of APEX beyond the simple systems for which it was initially conceived. In particular, we show how to use APEX to deal with compounds that undergo acid–base equilibria, and with the photochemistry of systems such as stratified lakes, lakes undergoing evaporation, and rivers. Hopefully, this work will provide a reference for the smooth use of one of the most powerful instruments for the modeling of photochemical processes in freshwater environments. All authors have read and agreed to the published version of the manuscript.
机译:APEX(环境异源生物的水性光化学)软件可计算日照地表水中化合物的光转化动力学。它是基于Octave的免费软件,最初于2014年发布。从那时起,APEX被证明是一个非常灵活的平台,可以解决多个环境问题。但是,将APEX视为独立软件不利于充分利用其潜力。相反,它是整个生态系统的一部分,该生态系统同时包含软件和实验室协议,可以测量底物的光反应性参数。与此观点相一致,本文展示了如何使用APEX,以及如何通过实验得出或大致评估所需的输入数据。还应注意可能会给用户带来障碍的一些问题,包括将APEX扩展到最初设想的简单系统之外。特别是,我们展示了如何使用APEX处理经历酸碱平衡的化合物,以及分层湖,经历蒸发的湖泊和河流等系统的光化学反应。希望这项工作将为平滑使用最强大的仪器之一在淡水环境中光化学过程建模提供参考。所有作者均已阅读并同意该手稿的发行版本。

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