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Phenotypic and genotypic analysis of variability in Aspergillus fumigatus.

机译:烟曲霉变异性的表型和基因型分析。

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摘要

Sixty-one isolates and collection strains of Aspergillus fumigatus were compared for their phenotypic (morphological features and isoenzyme profiles) and genotypic (restriction enzyme-generated mitochondrial DNA and ribosomal DNA profiles and random amplified polymorphic DNA patterns) features. The examined strains exhibited highly variable colony morphologies and growth rates at different temperatures, but their micromorphologies and conidial diameters were characteristic of the species. Of the isoenzymes studied, the beta-arylesterase and phosphatase patterns were the most divergent, and the 61 strains could be classified into seven groups. The glucose 6-phosphate dehydrogenase and catalase isoenzyme patterns displayed only a limited variability, while the profiles of superoxide dismutase, lactate dehydrogenase, and glutamate dehydrogenase were highly conserved. The HaeIII-generated mitochondrial DNA patterns and SmaI-digested repetitive DNA and ribosomal DNA hybridization patterns of almost all strains were also invariable. The level of variation was much higher when random amplified polymorphic DNA analysis was applied. Although the patterns of the strains were very similar with most of the primers, the application of some primers made it possible to cluster the A. fumigatus isolates into several groups. The results indicate that the random amplified polymorphic DNA technique could be used more efficiently than isoenzyme analysis for typing A. fumigatus isolates. A good correlation was found between the dendrograms obtained from the isoenzyme and random amplified polymorphic DNA data, but the isoenzyme and amplified DNA patterns did not correlate with the pathogenicity, pigment production, or geographical origin of the strains.(ABSTRACT TRUNCATED AT 250 WORDS)
机译:比较了烟曲霉的61个分离株和收集菌株的表型(形态特征和同工酶谱)和基因型(限制性内切酶产生的线粒体DNA和核糖体DNA谱以及随机扩增的多态DNA谱)特征。所检查的菌株在不同温度下表现出高度可变的菌落形态和生长速率,但是它们的微观形态和分生孢子直径是该物种的特征。在研究的同工酶中,β-芳基酯酶和磷酸酶的模式差异最大,这61个菌株可分为7组。葡萄糖6-磷酸脱氢酶和过氧化氢酶的同工酶模式仅显示出有限的变异性,而超氧化物歧化酶,乳酸脱氢酶和谷氨酸脱氢酶的谱图高度保守。几乎所有菌株的HaeIII生成的线粒体DNA模式以及SmaI消化的重复DNA和核糖体DNA杂交模式也是不变的。当应用随机扩增多态性DNA分析时,变异水平更高。尽管菌株的模式与大多数引物非常相似,但某些引物的应用使将烟曲霉分离株聚为几类成为可能。结果表明,比同工酶分析更有效地利用随机扩增多态性DNA技术对烟曲霉菌株进行分型。从同工酶获得的树状图与随机扩增的多态性DNA数据之间发现有很好的相关性,但同工酶和扩增的DNA模式与菌株的致病性,色素生成或地理起源无关(摘要摘录于250字)。

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