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An Unexpected Twist in Viral Capsid Maturation

机译:病毒衣壳成熟的意外扭曲

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摘要

Lambda-like dsDNA bacteriophage undergo massive conformational changes in their capsid shell during the packaging of their viral genomes. Capsid shells are complex organizations of hundreds of protein subunits that assemble into intricate quaternary complexes that ultimately are able to withstand over 50 atm. of pressure during genome packaging. The extensive integration between subunits in capsids is unlikely to form in a single assembly step, therefore requiring formation of an intermediate complex, termed a procapsid, from which individual subunits can undergo the necessary refolding and structural rearrangements needed to transition to the more stable capsid. Though various mature capsids have been characterized at atomic resolution, no such procapsid structure is available for a dsDNA virus or bacteriophage that undergoes large scale conformational changes. We present a procapsid x-ray structure at 3.65Å resolution, termed Prohead II, of the lambda like bacteriophage HK97, whose mature capsid structure was previously solved to 3.44 Å2. A comparison of the two largely different capsid forms has unveiled an unprecedented expansion mechanism that describes the transition. Crystallographic and Hydrogen/Deuterium exchange data presented here demonstrates that the subunit tertiary structures are significantly different between the two states, with twisting and bending motions occurring in both helical and β-sheet regions. We have also discovered conserved subunit interactions at each 3-fold of the virus capsid, from which capsid subunits maintain their integrity during refolding, facilitating the rotational and translational motions of maturation. Calormetric data of a closely related bacteriophage, P22, showed that capsid maturation was an exothermic process that resulted in a release of 90KJ/mol of energy. We propose the major tertiary changes presented in this study reveal a structural basis for an exothermic maturation process likely present in many dsDNA Bacteriophage and possibly viruses such as Herpes which share the HK97 subunit fold.
机译:Lambda样dsDNA噬菌体在包装病毒基因组期间衣壳中发生了巨大的构象变化。衣壳是由数百个蛋白质亚基组成的复杂组织,这些蛋白质亚基组装成复杂的四元复合物,最终能够承受超过50个大气压。包装过程中压力的变化 。衣壳中亚基之间的广泛整合不太可能在单个组装步骤中形成,因此需要形成称为前衣壳的中间复合物,从中可以使各个亚基经历必要的重折叠和结构重排,以过渡到更稳定的衣壳。尽管已经以原子分辨率表征了各种成熟的衣壳,但是对于经历大规模构象变化的dsDNA病毒或噬菌体,尚无这样的前衣壳结构。我们提出了λ样细菌噬菌体HK97的3.65Å分辨率的壳前X射线结构,称为Prohead II,其先前的成熟衣壳结构已解析为3.44Å 2 。对两种截然不同的衣壳形式进行比较后,发现了前所未有的扩展机制,它描述了这种转变。此处提供的晶体学和氢/氘交换数据表明,这两个状态之间的亚基三级结构显着不同,在螺旋和β片层区域均发生扭曲和弯曲运动。我们还发现了病毒衣壳的每个3倍的保守亚基相互作用,衣壳亚基在重折叠过程中从中保持其完整性,从而促进了成熟的旋转和平移运动。密切相关的噬菌体P22的量热数据表明,衣壳成熟是一个放热过程,导致释放90KJ / mol能量 。我们认为,本研究中提出的主要三次变化揭示了许多dsDNA噬菌体中可能存在的放热成熟过程的结构基础,并可能存在共享HK97亚基fold 的病毒(例如疱疹)。

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