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首页> 外文期刊>Physical review, E >Theory of morphological transformation of viral capsid shell during the maturation process in the HK97 bacteriophage and similar viruses
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Theory of morphological transformation of viral capsid shell during the maturation process in the HK97 bacteriophage and similar viruses

机译:HK97噬菌体和类似病毒成熟过程中病毒衣壳形态转化的理论。

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We consider the symmetry and physical origin of collective displacement modes playing a crucial role in the morphological transformation during the maturation of the HK97 bacteriophage and similar viruses. It is shown that the experimentally observed hexamer deformation and pentamer twist in the HK97 procapsid correspond to the simplest irreducible shear strain mode of a spherical shell. We also show that the icosahedral faceting of the bacteriophage capsid shell is driven by the simplest irreducible radial displacement field. The shear field has the rotational icosahedral symmetry group I while the radial field has the full icosahedral symmetry I-h. This difference makes their actions independent. The radial field sign discriminates between the icosahedral and the dodecahedral shapes of the faceted capsid shell, thus making the approach relevant not only for the HK97-like viruses but also for the parvovirus family. In the frame of the Landau-Ginzburg formalism we propose a simple phenomenological model valid for the first reversible step of the HK97 maturation process. The calculated phase diagram illustrates the discontinuous character of the virus shape transformation. The characteristics of the virus shell faceting and expansion obtained in the in vitro and in vivo experiments are related to the decrease in the capsid shell thickness and to the increase of the internal capsid pressure.
机译:我们认为,HK97噬菌体和类似病毒成熟期间,集体置换模式的对称性和物理起源在形态转化中起着至关重要的作用。结果表明,HK97壳体中实验观察到的六聚体变形和五聚体扭曲对应于球形壳最简单的不可还原的剪切应变模式。我们还表明,噬菌体衣壳的二十面体刻面是由最简单的不可还原的径向位移场驱动的。剪切场具有旋转的二十面体对称群I,而径向场具有完整的二十面体对称群I-h。这种差异使他们的行为独立。径向场标志区分了多面衣壳的二十面体和十二面体形状,因此该方法不仅适用于HK97样病毒,而且适用于细小病毒家族。在Landau-Ginzburg形式主义的框架中,我们提出了一个简单的现象学模型,适用于HK97成熟过程的第一步可逆步骤。计算出的相图说明了病毒形状转化的不连续性。在体外和体内实验中获得的病毒壳刻面和膨胀的特征与衣壳厚度的减少和衣壳内部压力的增加有关。

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