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Genetic association study identified a 20 kb regulatory element in WLS associated with osteoporosis and bone mineral density in Han Chinese

机译:遗传关联研究在汉族人群中发现了WLS中20 kb的调控元件与骨质疏松症和骨矿物质密度有关

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摘要

Previous studies have linked the WNT pathway and human skeleton formation; therefore, genes related to WNT might contribute to the onset and development of osteoporosis. In this study, we investigated the potential genetic association of WLS, which encodes an important mediator in the WNT pathway, with osteoporosis and its related quantitative traits in a sample of 6,620 individuals from Han Chinese population. A two-stage approach, with a discovery stage with 859 cases and 1,690 controls and a validation stage with 1,039 cases and 3,032 controls, was applied in the study. Forty SNPs were genotyped in the discovery stage. The intronic SNP rs2566752 was identified to be significantly associated with osteoporosis (ORdiscovery = 0.78, P discovery = 3.73 × 10−5; ORvalidation = 0.80, P validation = 1.96 × 10−5). Two SNPs surrounding rs2566752 (in addition to this SNP itself) were identified to be associated with bone mineral density. In addition, we have identified a 20 kb peak region of H3K27Ac histone mark enrichment between rs2772304 and rs2566752. Our study suggested that WLS is an important locus for osteoporosis and its related quantitative phenotypes in Han Chinese population. Additional sequencing-based studies are needed to investigate the genetic architecture of this regulatory region and its relationship with osteoporosis-related phenotypes.
机译:先前的研究已将WNT途径与人体骨骼形成联系在一起。因此,与WNT相关的基因可能有助于骨质疏松症的发生和发展。在这项研究中,我们调查了潜在的WLS遗传关联,WLS编码WNT途径中的重要介体,与骨质疏松症及其相关的定量性状在来自中国汉族人群的6,620个人样本中进行。在研究中采用了两阶段方法,发现阶段有859例病例和1,690例对照,验证阶段有1,039例病例和3,032例对照。在发现阶段对40个SNP进行了基因分型。内含子SNP rs2566752被确定与骨质疏松症显着相关(ORdiscovery = 0.78,P发现= 3.73×10 −5 ; ORvalidation = 0.80,Pvalidation = 1.96×10 −5 )。 rs2566752周围的两个SNP(除了此SNP本身)被确定与骨矿物质密度有关。另外,我们在rs2772304和rs2566752之间鉴定出H3K27Ac组蛋白标记富集的20 kb峰区域。我们的研究表明,WLS是汉族人群骨质疏松症及其相关定量表型的重要场所。还需要其他基于测序的研究来研究该调控区的遗传结构及其与骨质疏松症相关表型的关系。

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