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Registered report: Diverse somatic mutation patterns and pathway alterations in human cancers

机译:注册报告:人类癌症中多种体细胞突变模式和途径改变

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The seeks to address growing concerns about reproducibility in scientific research by conducting replications of selected experiments from a number of high-profile papers in the field of cancer biology. The papers, which were published between 2010 and 2012, were selected on the basis of (). This Registered Report describes the proposed replication plan of key experiments from "Diverse somatic mutation patterns and pathway alterations in human cancers" by Kan and colleagues published in Nature in 2010 (). The experiments to be replicated are those reported in Figures 3D-F and 4C-F. Kan and colleagues utilized mismatch repair detection (MRD) technology to identify somatic mutations in primary human tumor samples and identified a previously uncharacterized arginine 243 to histidine (R243H) mutation in the G-protein α subunit GNAO1 in breast carcinoma tissue. In Figures 3D-F, Kan and colleagues demonstrated that stable expression of mutant GNAO1R243D conferred a significant growth advantage in human mammary epithelial cells, confirming the oncogenic potential of this mutation. Similarly, expression of variants with somatic mutations in MAP2K4, a JNK pathway kinase (shown in Figures 4C-E) resulted in a significant increase in anchorage-independent growth. Interestingly, these mutants exhibited reduced kinase activity compared to wild type MAP2K4, indicating these mutations impose a dominant-negative influence to promote growth (Figure 4F). The Reproducibility Project: Cancer Biology is a collaboration between the and and the results of the replications will be published in eLife.>DOI:
机译:该研究试图通过从癌症生物学领域的许多著名论文中复制选定的实验来解决对科学研究可重复性的日益增长的关注。根据()选择了2010年至2012年之间发表的论文。这份已注册的报告描述了拟议的关键实验的复制计划,该计划是由Kan和其同事在2010年《自然》杂志上发表的“人类癌症中的多种体细胞突变模式和途径改变”提出的。要复制的实验是图3D-F和4C-F中报告的那些。 Kan和他的同事利用错配修复检测(MRD)技术鉴定了人类原发性肿瘤样本中的体细胞突变,并确定了乳腺癌组织中G蛋白α亚基GNAO1中先前未鉴定的精氨酸243至组氨酸(R243H)突变。在图3D-F中,Kan及其同事证明了突变体GNAO1 R243D 的稳定表达赋予了人类乳腺上皮细胞显着的生长优势,证实了该突变的致癌潜力。同样,在JNK通路激酶MAP2K4(图4C-E中显示)中具有体细胞突变的变体表达导致锚定非依赖性生长显着增加。有趣的是,与野生型MAP2K4相比,这些突变体表现出降低的激酶活性,表明这些突变施加了显性负性影响以促进生长(图4F)。可重复性项目:癌症生物学是和之间的合作,复制结果将在eLife中发布。> DOI:

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