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Amplification and elimination of a new class of transposon-like element through the evolution of Triticeae genome

机译:通过Triticea Genome的演化扩增和消除新类转座子样元素

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A new class of transposon-like element designated Revolver (Rev) has been discovered in the Triticeae genome. The Rev element encompassing 3041 bp is dispersed in the genome by flanking with 14 bp of terminal inverted repeated sequence on the both ends. Rev element is transcriptionally active. Rev cDNA (726 bp) identified in some Triticeae species elucidate that Rev bears 3 exons (342, 88, 296 bp) and 2 introns (750, 1,237 bp). The processed Rev mRNA contains a single ORF encoding 118 amino acid residues of protein, which features a transcriptional regulator with DNA binding ability. The entire structure of Rev dose not share identity with both the class 1 and class II transposable elements. The novel element Rev is abundant in the genomes of wheatrelatives, Secale (RR), Dasypyrum (VV), as well as wheat ancestor species, Triticum monococcum (AA), T. turgidum (AABB) and T. tauschii (DD). At least ten thousand copies of Rev arc distributed over entire length of rye chromosomes. However, Rev is not detected in the genome of T. aestivum (AABBDD). These facts indicate that Rev element have been existed since the diploid progenitor of wheat, then it has been amplifying in some species, while disappearing in bread wheat through the evolution.
机译:在Triticea Genome中发现了一类新的转座子样元素指定的左轮手枪(Rev)。包围3041bp的Rev元素通过在两端的两端的末端反复重复序列的侧面侧翼分散在基因组中。 Rev元素转录有效。在某些麦片种类中鉴定的Rev cDNA(726bp)阐明,Rev带3个外显子(342,88,296bp)和2内含子(750,1237 bp)。加工后的RevmRNA含有单个ORF编码蛋白质的118个氨基酸残基,其具有具有DNA结合能力的转录调节剂。 Rev剂量的整个结构不与第1类和II类转换元素共享身份。新的Element Rev在Wheatreliens,Secale(RR),达斯多米(VV)的基因组中,以及小麦祖先(AA),T. Turgidum(AABB)和T.Tauschii(DD)的小麦祖先物种。在整个Rye染色体的整个长度上分布了至少一万份Rev弧。然而,在T. aestivum(AABBDD)的基因组中未检测到Rev。这些事实表明,由于小麦的二倍体祖先,因此已经存在Rev元素,然后在某些物种中放大,同时通过进化在面包小麦中消失。

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