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Side chain motions and end-to-end distance distribution in alpha-helical peptides

机译:α-螺旋肽中的侧链运动和端到端距离分布

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The application of resonance fluorescence energy transfer measurements for the analysis of conformational states of neuropeptide galanin revealed the coexistence of different structures in solution. This method is complementary to other spectroscopic structural methods like 2D NMR. The energy transfer between a fluorescence donor and acceptor gives direct information about the long distance separation of defined residues of a molecule in analogy to the nuclear Overhauser effect (NOE) which is limited to short distances. A special analysis of experimental results has been performed to get the distribution function of these distances instead of one averaged value for the investigated system. This approach enables the investigation of the coexistence of different sub-populations and the dynamic equilibrium between them. Due to its high time resolution of sub-nanoseconds, energy transfer measurements show the 'frozen' distribution of conformations which are not averaged during the time range characteristic for this process, in contrast to NMR experiments (milliseconds). Large mobility of the energy donor and acceptor leads to high precision of the distance determination. The distribution of conformations corresponds to the diversity of structures found for galanin with NMR spectroscopy.
机译:共振荧光能量转移测量对神经肽甘肽构象状态分析的应用揭示了溶液中不同结构的共存。该方法与其他光谱结构方法互补,如2D NMR。荧光供体和受体之间的能量转移给出了关于分子的定义残基的长距离分离的直接信息,与核传闻效应(NOE)限制在短距离。已经进行了对实验结果的特殊分析,以获得这些距离的分布函数,而不是调查系统的一个平均值。这种方法能够调查不同子群的共存和它们之间的动态均衡。由于其亚纳秒的高度分辨率,能量传递测量显示了与NMR实验相比(毫秒)的时间范围特征期间未平均的“冷冻”的构象分布。能量供体和受体的大型移动性导致远程测定的高精度。构象的分布对应于具有NMR光谱的环肽的结构的多样性。

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