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Density Functional Theory Calculations on the Sorption of Organoarsenicals onto Hydrated Iron (III) Oxyhydroxide Clusters

机译:水合氧化铁(III)团簇吸附有机砷的密度泛函理论计算

摘要

Organic forms of arsenic are introduced into the environment by natural and anthropogenic processes and they pose a threat to human health. The fate of these pollutants depends on their interactions with reactive soils components, such as iron oxyhydroxides. Reaction pathway information and transition states are essential for understanding adsorption mechanisms of pollutants at the liquid–solid interface. Density functional theory (DFT) calculations on the energies, optimal geometries, vibrational frequencies for organic arsenical complexes, p-arsanilic acid (pAsA), monomethylarsonic acid (MMA) and dimethylarsinic acid (DMA) with iron oxyhydroxide clusters are performed. In addition, changes in Gibbs free energy, enthalpy, and entropy for various types of ligand exchange reactions leading to both inner- and outer-sphere complexes are presented, along with activation barriers and transition states. Results are compared to calculations using the well-studied arsenate system and various experiments that use surface sensitive techniques. DFT calculations show that the formation of inner- and outer-sphere complexes with pAsA, MMA and DMA is thermodynamically favourable, but also that the activation barriers are crucial in understanding the types of complexes that form. It is shown that the mono-substituted arsenicals, pAsA and MMA, are more likely to form inner-sphere complexes, but that the di-substituted DMA, may be hindered to do so because of higher activation barriers along its reaction pathway. The calculations reported herein include explicit and implicit solvation, as well as dispersion corrections, that are shown to be particularly useful for calculations where outer-sphere complexes are involved. Calculations include both a smaller iron oxyhydroxide surface with 2 Fe atoms at its core and an extended iron oxyhydroxide surface with 4 Fe atoms at its core. The 4Fe geometries were shown to be particularly important for outer-sphere and monodentate complexes where the 2Fe complexes suffered from an over-relaxation problem that overestimates the stability of a complex. The Mulliken charge distribution analysis performed on the DMA systems revealed that there is no charge transferred in the formation of the outer-sphere complexes, suggesting outer-sphere complex formation is purely electrostatic while charge is transferred from the ligand to the metal when inner-sphere complexes form. The theoretical infrared spectra for pAsA, DMA and MMA are compared to experimental results and the formation of outer-sphere and inner-sphere complexes are discussed. The theoretical frequencies are also used to calculate a new scaling factor (F=1.0065) to correct the stretching vibrations of the As-O bond of organoarsenicals for anharmonicity.
机译:砷的有机形式是通过自然和人为过程引入环境的,它们对人类健康构成威胁。这些污染物的命运取决于它们与活性土壤成分(例如羟基氧化铁)的相互作用。反应路径信息和过渡态对于理解污染物在液-固界面的吸附机理至关重要。进行了密度泛函理论(DFT)对羟基氧化铁簇的有机砷配合物,对砷酸(pAsA),一甲基ar酸(MMA)和二甲基dimethyl酸(DMA)的能量,最佳几何形状,振动频率的计算。此外,还给出了导致内球和外球复合物的各种类型配体交换反应的吉布斯自由能,焓和熵的变化,以及活化势垒和过渡态。使用经过深入研究的砷酸盐系统和使用表面敏感技术的各种实验,将结果与计算结果进行比较。 DFT计算表明,在热力学上有利于与pAsA,MMA和DMA形成内球和外球配合物,但活化障碍对于理解所形成的配合物的类型也至关重要。结果表明,单取代的砷化合物pAsA和MMA更有可能形成内球络合物,但双取代的DMA可能由于其沿反应路径的更高的活化势垒而受到阻碍。本文报道的计算包括显式和隐式溶剂化,以及色散校正,这对于涉及外层复合物的计算特别有用。计算既包括较小的羟基氧化铁表面,其核心为2个Fe原子,也包括较大的羟基氧化铁表面,其核心为4个Fe原子。事实证明,4Fe的几何形状对于外圈和单齿复合物特别重要,其中2Fe复合物遭受过高松弛问题,该问题过高估计了复合物的稳定性。在DMA系统上进行的Mulliken电荷分布分析表明,在外球络合物的形成过程中没有电荷转移,这表明当内球时电荷从配体转移到金属时,外球络合物的形成是纯静电的配合物形式。将pAsA,DMA和MMA的理论红外光谱与实验结果进行了比较,并讨论了外层和内层复合物的形成。理论频率还用于计算新的比例因子(F = 1.0065),以校正有机砷的As-O键的拉伸振动以实现非谐性。

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    Adamescu Adrian;

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  • 年度 2017
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  • 正文语种 en
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