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Oesophagostomum dentatum and Oesophagostomum quadrispinulatum: Characterization of the complete mitochondrial genome sequences of the two pig nodule worms

机译:Oesophagostomum dentatum and Oesophagostomum quadrispinulatum: Characterization of the complete mitochondrial genome sequences of the two pig nodule worms

摘要

In the present study, the complete mitochondria! DNA (mtDNA) sequences of the pig nodule worm Oesophagostomum quadrispinulatum were determined for the first time, and the mt genome of Oesophagostomum dentatum from China was also sequenced for comparative analysis of their gene contents and genome organizations. The mtDNA sequences of O. dentatum China isolate and O. quadrispinulatum were 13,752 and 13,681 bp in size, respectively. Each of the two mt genomes comprises 36 genes, including 12 protein-coding genes, two ribosomal RNA and 22 transfer RNA genes, but lacks the ATP synthetase subunit 8 gene. All genes are transcribed in the same direction and have a nucleotide composition high in A and T. The contents of A + T are 75.79% and 77.52% for the nit genomes of O. dentatum and O. quadrispinulatum, respectively. Phylogenetic analyses using concatenated amino acid sequences of the 12 protein-coding genes, with three different computational algorithms (maximum likelihood, maximum parsimony and Bayesian inference), all revealed that O. dentatum and O. quadrispinulatum represent distinct but closely-related species. These data provide novel and useful markers for studying the systematics, population genetics and molecular diagnosis of the two pig nodule worms. (C) 2012 Elsevier Inc. All rights reserved.
机译:在本研究中,完整的线粒体!首次确定了猪结节虫四角食肉动物的DNA(mtDNA)序列,并对来自中国的齿牙食管鱼的mt基因组进行了测序,以比较它们的基因含量和基因组组织。齿形油曲霉中国分离株和四倍体油曲霉的mtDNA序列分别为13,752和13,681 bp。这两个mt基因组的每个基因组包含36个基因,其中包括12个蛋白质编码基因,两个核糖体RNA和22个转移RNA基因,但缺少ATP合成酶亚基8基因。所有基因都以相同的方向转录,并且在A和T处具有较高的核苷酸组成。对于齿齿稻和四齿松的nit基因组,A + T的含量分别为75.79%和77.52%。使用12种蛋白质编码基因的串联氨基酸序列进行的系统发育分析,以及三种不同的计算算法(最大似然,最大简约和贝叶斯推断),都表明齿齿形稻和四齿松形藻是不同但密切相关的物种。这些数据为研究两种猪结节虫的系统学,种群遗传学和分子诊断提供了新颖而有用的标记。 (C)2012 Elsevier Inc.保留所有权利。

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