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DNA barcoding of wild Ganoderma specimens and cultivated strains in Hungary

机译:匈牙利野生灵芝标本和栽培菌株的DNA条形码

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摘要

The cosmopolitan polypore genus Ganoderma (Polyporales, Basidiomycota) has anudenormous economic value, due to the caused diseases on different tree plantationsud(e.g. G. boninense in oil palms) and the medicinal properties of certain species (e.g.udG. applanatum, G. lingzhi and G. sinense). The cultivated Ganoderma strains used byudHungarian growers originate both from selected wild strains or more oftenudtaxonomically not evaluated isolates with uncertain origin. However, based onudmorphological characteristics, the species concepts in the genus lack consensus,udand the taxonomy of many Ganoderma taxa is thus problematic. Therefore, inudaddition to the morphological examination, suitable molecular methods haveudrecently been required to the taxonomically correct identification of the wildudGanoderma species and cultivated strains in many cases. DNA barcode is a widelyudaccepted tool for species identification and authentication of commercial productsudcontaining Ganoderma species. Among the tested fungal DNA barcoding markers,udthe application of the internal transcribed spacer (ITS) is the most commonly usedudand it was formally proposed as the primary fungal barcode marker. Besides theudITS, several other DNA barcoding markers were used by different authors toudclarify taxonomic difficulties in Ganoderma: e.g. β-tubulin, LSU, rpb1, rpb2, Tef1-αudor the mtSSU rDNA sequence. Formerly, the Hungarian Ganoderma species (viz. G.udadspersum, G. applanatum, G. carnosum, G. cupreolaccatum, G. lucidum and G.udresinaceum) were briefly studied by Papp and Szabó (2013, in Acta Silv. Lign.udHung. 9: 71–83.), however, based on solely morphological charactersitics. In thisudstudy we aimed (i) to generate DNA barcoding sequences for all wild Ganodermaudspecies observed in Hungary; furthermore, (ii) to investigate and evaluate theudHungarian cultivated strains labelled as “G. lucidum” and the Ganoderma spp.udisolates preserved in culture collections, based on DNA barcoding sequenceudanalysis. Supported by the ÚNKP-17-4 New National Excellence Program of theudMinistry of Human Capacities.
机译:世界性的多孢菌属灵芝(Polyporales,Basidiomycota)具有不合常规的经济价值,这是由于不同树种上的病害(例如油棕中的博尼丁香)和某些物种的药用特性(例如,udg。applanatum) ,G。lingzhi和G. sinense)。匈牙利种植者使用的栽培灵芝菌株既来自选定的野生菌株,也来自来源于遗传学上未经评估的不确定菌株。但是,基于形态特征,该属中的物种概念缺乏共识,因此许多灵芝类群的分类学是有问题的。因此,除了形态学检查外,在许多情况下,迫切需要合适的分子方法来分类正确地鉴定野生 ud灵芝物种和栽培菌株。 DNA条码是一种广泛的公认的工具,用于对商品含灵芝物种进行物种鉴定和认证。在测试的真菌DNA条形码标记中,最常用的是使用内部转录间隔子(ITS),并正式提议将其用作主要的真菌条形码标记。除了udITS,其他作者还使用了其他几种DNA条形码标记来阐明灵芝的分类学困难: β-微管蛋白,LSU,rpb1,rpb2,Tef1-α或mtSSU rDNA序列。以前,匈牙利的灵芝物种(即G. udadspersum,G。applanatum,G。carnosum,G.cupreolaccatum,G.lucidum和G. udresinaceum)由Papp和Szabó(2013,在Acta Silv.Lign中)进行了简短的研究。 ( udHung。9:71–83。),但是,仅基于形态特征。在本研究中,我们旨在(i)为匈牙利观察到的所有野生灵芝种产生DNA条形码序列;此外,(ii)调查和评估标有“ G. ”和灵芝菌种基于培养液DNA条形码序列 udanalysis保存的聚附物。由 ud _____的人力资源部的新国家卓越计划的支持。

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