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Progressive colonization and restricted gene flow shape island-dependent population structure in Galápagos marine iguanas (Amblyrhynchus cristatus)

机译:加拉帕戈斯海鬣蜥(Amblyrhynchus cristatus)的渐进定居和受限制的基因流形状依赖岛屿的种群结构

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摘要

Background\ud\udMarine iguanas (Amblyrhynchus cristatus) inhabit the coastlines of large and small islands throughout the Galápagos archipelago, providing a rich system to study the spatial and temporal factors influencing the phylogeographic distribution and population structure of a species. Here, we analyze the microevolution of marine iguanas using the complete mitochondrial control region (CR) as well as 13 microsatellite loci representing more than 1200 individuals from 13 islands.\udResults\ud\udCR data show that marine iguanas occupy three general clades: one that is widely distributed across the northern archipelago, and likely spread from east to west by way of the South Equatorial current, a second that is found mostly on the older eastern and central islands, and a third that is limited to the younger northern and western islands. Generally, the CR haplotype distribution pattern supports the colonization of the archipelago from the older, eastern islands to the younger, western islands. However, there are also signatures of recurrent, historical gene flow between islands after population establishment. Bayesian cluster analysis of microsatellite genotypes indicates the existence of twenty distinct genetic clusters generally following a one-cluster-per-island pattern. However, two well-differentiated clusters were found on the easternmost island of San Cristóbal, while nine distinct and highly intermixed clusters were found on youngest, westernmost islands of Isabela and Fernandina. High mtDNA and microsatellite genetic diversity were observed for populations on Isabela and Fernandina that may be the result of a recent population expansion and founder events from multiple sources.\udConclusions\ud\udWhile a past genetic study based on pure FST analysis suggested that marine iguana populations display high levels of nuclear (but not mitochondrial) gene flow due to male-biased dispersal, the results of our sex-biased dispersal tests and the finding of strong genetic differentiation between islands do not support this view. Therefore, our study is a nice example of how recently developed analytical tools such as Bayesian clustering analysis and DNA sequence-based demographic analyses can overcome potential biases introduced by simply relying on FST estimates from markers with different inheritance patterns.
机译:背景\ u \ ud海洋鬣蜥(Amblyrhynchus cristatus)栖息在整个加拉帕戈斯群岛的大小岛屿的海岸线上,为研究影响物种地理分布和种群结构的时空因素提供了丰富的系统。在这里,我们使用完整的线粒体控制区(CR)以及代表13个岛屿的1200多个个体的13个微卫星基因座,分析了海鬣蜥的微进化。\ udResults \ ud \ udCR数据显示,海鬣蜥占据了三大类:它分布在整个北部群岛,并且可能通过南赤道洋流从东向西扩散,第二个分布在东部和中部较早的岛屿上,第三个分布在较年轻的北部和西部地区岛屿。通常,CR单体型分布模式支持从较早的东部岛屿到较年轻的西部岛屿的群岛殖民。但是,种群建立后,岛之间也有周期性的历史基因流的迹象。微卫星基因型的贝叶斯聚类分析表明,通常遵循一个岛一岛的模式存在二十个不同的遗传簇。但是,在圣克里斯托瓦尔最东端的岛屿上发现了两个分化良好的星团,而在伊莎贝拉和最西端的伊莎贝拉岛和费尔南迪纳岛上发现了九个不同且高度混合的星团。伊莎贝拉(Isabela)和费尔南迪纳(Fernandina)的种群观察到较高的mtDNA和微卫星遗传多样性,这可能是近期种群扩张和来自多种来源的创始人事件的结果。\ ud结论\ ud \ ud基于纯FST分析的以往遗传研究表明,海鬣蜥由于男性偏见的扩散,人类种群显示出高水平的核(而不是线粒体)基因流动,我们对性别偏见的扩散测试的结果以及岛屿之间强烈的遗传分化的发现并不支持这种观点。因此,我们的研究是一个很好的例子,说明最近开发的分析工具(如贝叶斯聚类分析和基于DNA序列的人口统计分析)如何克服仅通过依赖具有不同遗传模式的标记的FST估计而引入的潜在偏差。

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