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Toward reliable algorithmic self-assembly of DNA tiles: A fixed-width cellular automaton pattern

机译:迈向可靠的DNA碎片算法自组装:固定宽度的细胞自动机模式

摘要

Bottom-up fabrication of nanoscale structures relies on chemical processes to direct self-assembly. The complexity, precision, and yield achievable by a one-pot reaction are limited by our ability to encode assembly instructions into the molecules themselves. Nucleic acids provide a platform for investigating these issues, as molecular structure and intramolecular interactions can encode growth rules. Here, we use DNA tiles and DNA origami to grow crystals containing a cellular automaton pattern. In a one-pot annealing reaction, 250 DNA strands first assemble into a set of 10 free tile types and a seed structure, then the free tiles grow algorithmically from the seed according to the automaton rules. In our experiments, crystals grew to ~300 nm long, containing ~300 tiles with an initial assembly error rate of ~1.4% per tile. This work provides evidence that programmable molecular self-assembly may be sufficient to create a wide range of complex objects in one-pot reactions.ud
机译:纳米级结构的自下而上制造依赖于化学过程来指导自组装。一锅反应可实现的复杂性,精确度和产率受我们将组装说明编码到分子本身中的能力所限制。核酸为研究这些问题提供了平台,因为分子结构和分子内相互作用可以编码生长规则。在这里,我们使用DNA瓦片和DNA折纸来生长包含细胞自动机图案的晶体。在单锅退火反应中,首先将250条DNA链组装成10种自由瓦类型和种子结构的集合,然后根据自动机规则从种子中自由生长算法。在我们的实验中,晶体长到约300 nm,包含约300个磁贴,初始装配错误率为每个磁贴约1.4%。这项工作提供了证据,表明可编程分子自组装可能足以在一锅反应中创建各种复杂的物体。

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