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Globally optimal breast mass segmentation from DCE-MRI using deep semantic segmentation as shape prior

机译:从DCE-MRI使用深层语义分割作为形状的全球最佳乳房分段

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摘要

We introduce a new fully automated breast mass segmentation method from dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI). The method is based on globally optimal inference in a continuous space (GOCS) using a shape prior computed from a semantic segmentation produced by a deep learning (DL) model. We propose this approach because the limited amount of annotated training samples does not allow the implementation of a robust DL model that could produce accurate segmentation results on its own. Furthermore, GOCS does not need precise initialisation compared to locally optimal methods on a continuous space (e.g., Mumford-Shah based level set methods); also, GOCS has smaller memory complexity compared to globally optimal inference on a discrete space (e.g., graph cuts). Experimental results show that the proposed method produces the current state-of-the-art mass segmentation (from DCEMRI) results, achieving a mean Dice coefficient of 0.77 for the test set.
机译:我们从动态对比度增强的磁共振成像(DCE-MRI)介绍了一种新的全自动乳房质量分割方法。该方法基于使用由深度学习(DL)模型产生的语义分割以前计算的形状在连续空间(GOC)中的全局最佳推断。我们提出了这种方法,因为有限的注释培训样本不允许实施可能会自行产生准确的分段结果的强大DL模型。此外,与连续空间的局部最佳方法相比,GOCs不需要精确初始化(例如,Mumford-Shah基于水平集方法);此外,与离散空间的全局最佳推断相比,GOCS具有较小的内存复杂性(例如,图形切割)。实验结果表明,该方法产生了当前最先进的质量分割(来自DCEMRI)结果,实现了测试集的平均骰子系数0.77。

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